libStatGen version 1.0.9 is now available

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libStatGen

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Jul 7, 2013, 12:41:50 PM7/7/13
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LibStatGen.1.0.9 Release Notes

  • Contains classes for general processiong (string, reference file, parameters), bam, glf, fastq, and vcf
    • Updates:
      • Update Makefile processing to check for a Makefile in the test directory before recursively calling make in there
      • Replace CFLAGS wtih COMPFLAGS
      • Update the Windows WIN32 if statements
    • General Updates:
      • Add boundary check to StringBasics memory
      • Added support for new CIGAR characters (X & =)
      • Update bug in PedigreeLoader to specify WHITESPACE
      • add accessors for getting tabix information
    • Vcf Updates:
      • add ability to drop trailing missing Genotype fields
      • check that the tabix index is for VCF file type
      • Fix broken dependency
    • Bam Updates:
      • SamHeaderRecord: add accessor to get the value for the key
      • update some classes to have virtual destructors

If you are interested in this version, it can be downloaded at:

Let me know if you have any questions.
Mary Kate Wing

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