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libStatGen version 1.0.9 is now available
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libStatGen
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Jul 7, 2013, 12:41:50 PM
7/7/13
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LibStatGen.1.0.9 Release Notes
Contains classes for general processiong (string, reference file, parameters), bam, glf, fastq, and vcf
Updates:
Update Makefile processing to check for a Makefile in the test directory before recursively calling make in there
Replace CFLAGS wtih COMPFLAGS
Update the Windows WIN32 if statements
General Updates:
Add boundary check to StringBasics memory
Added support for new CIGAR characters (X & =)
Update bug in PedigreeLoader to specify WHITESPACE
add accessors for getting tabix information
Vcf Updates:
add ability to drop trailing missing Genotype fields
check that the tabix index is for VCF file type
Fix broken dependency
Bam Updates:
SamHeaderRecord: add accessor to get the value for the key
update some classes to have virtual destructors
If you are interested in this version, it can be downloaded at:
http://genome.sph.umich.edu/wiki/LibStatGen_Download
Let me know if you have any questions.
Mary Kate Wing
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