Understanding LEfSe results table

97 views
Skip to first unread message

Clémence Landreau

unread,
May 13, 2019, 9:43:31 AM5/13/19
to LEfSe-users
Good afternoon,

I am a french student working on microbiota data in Crohn's disease. I am working with R.
I managed to run LEfSe but I have trouble understanding the results table and therefore creating the graph.

Can someone please explain to me what the columns "log.max.pct" and "direction" stand for ?
What are the values in columns V6, V7, etc ?
The first row with the groups is also confusing me.

I am enclosing a screenshot of my results table if it can help.

Thank you for your time !

Clémence
lefse_results.PNG
Reply all
Reply to author
Forward
0 new messages