I have problem with render function from jupyterhub.
When I call directly with R from command line - like
R -e 'rmarkdown::render("/tmp/test_rmarkdown.Rmd", output_file="minimal_output.html", output_dir="/tmp", clean=FALSE, quiet=FALSE, intermediates_dir="/tmp")'
or works fine. In output directory exists all files:
minimal_output.html
When I try to run same command from R kernel from Jupyterhub, calls produce only one file
No errors in jupetyrhub.log
Do you have any idea why ?
Thank you
Petr