Tiff Counter
Kanisha Dezarn
I have spent many hours trying to troubleshoot a problem I encountered when using a MacOSX platform and ImageJ. I have tried on a Mac with OS El Capitain as well as OS High Sierra and cannot get the Export Image function to work. I need to export a tiff image with the markers(acquired by an Axioscan) after having used the cell counter plugin to quantify 2 different markers. I can do this on a PC and seemed to have done it once on the Mac but could never reproduce it. Does anyone know if this is a bug ie. a java problem and would anyone know how to write script to overcome this problem?
I am not sure why that would happen. When the new window pops up, is it RGB type? And none of the markers are baked in? But your original image definitely has markers? I have not seen that issue before. Are you able to create a concise list of steps to reproduce, like how @etadobson wrote above? That would help others to troubleshoot the issue.
As a page counter, TIFF Page Counter also supports to browse different image effects. For example, you can choose any thumbnail in the side bar and click the buttons above to zoom in, zoom out, rotate, reverse, etc. You can see a clearer thumbnail of the one you chose just now in image preview area in the middle.
TIFF PDF counter is an easy to use TIFF and PDF page count application. TIFF PDF Counter would give you Pages of every single and multi page TIFF and PDF files and also Total number of pages in few seconds.
TIFF Combiner is tool to combine several single and multi-page TIFF files into one multi-page TIFF file. TIFF combiner has easy to use interface to combine TIFF files. You can set order of pages combine or merged into new file.
TIFF Splitter is tool to split multi-page TIFF files in single page TIFF files. TIFF splitter support every version of TIFF files and also compressed TIFF files. The application can also split TIFF into other image formats like jpeg, png, bmp and gif.
PDF Splitter is a tool to split multi-page PDF documents files in single page PDF documents or image files. You can also split pages by page range and can also set PDF properties for the new PDF files.
PDF Security is an application to add or remove PDF security in thousands of PDF files in one click only. The application supports to add and remove open and permission Password from PDF.
"Our experience using the TIFF PDF Counter has been great. It's easy to use, fast and effective!
Our business provides document scanning services. It's really important that we have a software where it can give an exact page count as well as provide the export application where we can keep an inventory list of files being processed. It's become a very effective tool that our office uses regularly."
"We needed TIFF PDF Counter for a project consisting of more than 200 PDFs and wanted to get an idea of the size of the project. It was a 100,000 pages. No training needed. Just install and start using it"
"BANG ON !!! I have to say Image to PDF Converter does exactly what you advertise. I use it because electronic blueprint files are provided from the Construction Association in TIF format, and many of the sub trades that I request pricing from cannot properly view these files. So, I have to convert them to PDF so everybody can open them. It is an excellent program with excellent features, and it comes at an excellent price. Can't go wrong with it!"
"We needed a tool to convert 400 tiff files to single and multiple page PDF files. Image to PDF Converter was the perfect tool for my image to PDF conversion project. It was quick to learn how to use and it did everything I had hoped for with ease and speed. Very user friendly and well-designed program. This tool did all that I had hoped for - and it made the transfer work quick and easy!Thanks so much for a great product!"
"PDF Splitter is easy to use and a low-cost and valuable tool that helps our law firm deal with productions of documents produced as a single large pdf. This pdf doesn't show where documents begin or end and so we need to split it so that we can code documents as privileged, hot document, and otherwise. PDF Splitter makes it possible for us to do this."
"Tiff Combiner works great for us.We are a trucking company and use TiffCombiner to merge driver paperwork, logs, Bills of Lading, etc.. Into 1 tiff file that we link into our databases for reviewing purposes."
What I want to to is to extract (split) the multi-tiff into single files. However if the tiff only contains one tiff (is not a multi-tiff), I would like to do nothing at all... Also if I use the "%d"-option to name the output files I get the "%d" in the file name if it is only one.
I first tried to load the image with imageio and tifffile. I noticed the same problem in both, but realised that imageio must use tifffile under the hood. Then, I was about to file a bug against tifffile, but thought I should at least check whether it had been fixed in the latest version. And, indeed, it has!
After taking a large cast iron pan off a wood butcher block countertop, I was horrified to find what appeared to be burn marks, which they couldn't be as the pan wasn't hot. I scrubbed viciously with various cleaners, to no avail. I really didn't want to have to sand it down, either. Enter: my other best friend, Google. I learned the iron oxide in the pan interacts with the tannins in the wood to create the black stains, but that oxalic acid is equally effective at removing those black iron stains, without damaging the wood. #BLESSED #CHEMISTRY ??
You can use something like sum_all_tiff_files from cisTEM, or similar to make a gain reference from all frames of the micrographs. That may correct that odd pattern. But the TIFF error reported stiff concerns me. Could be a bug in saving, could be memory corruption, could be storage failing. Sorry for wall-of-text, using a phone right now.
What is the rest of the output from the Import Movies job?
What format did you choose for the movies in EPU?
What size are the movie files?
Can you import the movies in Relion or any other software without getting the same offset error?
I have my script working until I try to export it as a tiff file. I literally copy/pasted the code from the Illustrator CS6 Scripting Reference example (the sub routine). I get an error on Line 34 getting an "Expected Identifier" error 800A03F2. In the example code line 30 is written as: Sub ExportFileAsTIFF (Dest) ' Dest contains the full path and file name to save to. So I added my full path. Any ideas?
CarlosCanto - help! if you come across this. I found a post you answered in 2015 'How to define 'dest' in Illustrator VBscript example?', and followed your answer. I applied the following to work with Tiffs but I get the following error message:
Here's what I have but it is drawing an error: "Expected Statement" at line 1. Since this is a VBscript do I need to activate Java in some way like "doJavaScript = ??" or will it pick it up automatically?
TIFFWriteDirectory() will write the contents of the currentdirectory (IFD) to the file and setup to create a new directory (IFD)using TIFFCreateDirectory().Applications only need to call TIFFWriteDirectory()when writing multiple subfiles (images) to a single TIFF file.This is called "multi-page TIFF" or "multi-image TIFF"(see Multi Page / Multi Image TIFF).TIFFWriteDirectory() is automatically called byTIFFClose() and TIFFFlush() to write a modifieddirectory if the file is open for writing.
The TIFFRewriteDirectory() function operates similarly toTIFFWriteDirectory(), but can be called with directoriespreviously read or written that already have an established locationin the file. It will rewrite the directory, but instead of placing itat its old location (as TIFFWriteDirectory() would) it willplace them at the end of the file, correcting the pointer from thepreceding directory or file header to point to it's new location. Thisis particularly important in cases where the size of the directory andpointed to data has grown, so it won't fit in the space available at theold location.
The TIFFCheckpointDirectory() writes the current state of thetiff directory into the file to make what is currently in the filereadable. Unlike TIFFWriteDirectory(),TIFFCheckpointDirectory() does not free up the directory datastructures in memory, so they can be updated (as strips/tiles arewritten) and written again. Reading such a partial file you will atworst get a tiff read error for the first strip/tile encountered thatis incomplete, but you will at least get all the valid data in the filebefore that. When the file is complete, just useTIFFWriteDirectory() as usual to finish it off cleanly.
The TIFFSetWriteOffset() sets the current write offset.This should only be used to set the offset to a known previous location(very carefully), or to 0 so that the next write gets appended to the endof the file.
The TIFFWriteCheck() verify file is writable and that the directoryinformation is setup properly. In doing the latter we also "freeze"the state of the directory so that important information is not changed.
Does anyone out there happen to know of a utility that can simply change theimage resolution values that are imbedded in a TIFF file? For example, Iwould like to be able to change 200 dpi to 400 dpi and thereby reduce theoutput size of the image by half, while maintaining the same pixel count. Idon't want to waste a bunch of time reading and writing the actual pixeldata, rather just directly replace the resolution values instead.
Why would I want to do that? Well for one thing, it would just be handysometimes to maintain relative image quality while changing the image size.But primarily I need this at the moment because it might allow me to workaround a bug in gimp 1.2.4 that seems to be triggered by exceeding a certainphysical dimension size limit for an image (NOT a maximum file size or pixelcount)
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