Version 150810-Public of Kaviar database

19 views

Skip to first unread message

Gustavo Glusman

unread,

Sep 23, 2015, 11:16:17 AM9/23/15

to Kaviar-announce

We released an updated version of Kaviar (150810-Public). http://db.systemsbiology.net/kaviar/

• Very significant expansion in content: updated all public sources, added new public sources, and added 3,842 whole genomes from the Inova Translational Medicine Institute (ITMI).

• Kaviar now includes data from 34 projects, encompassing 77,238 individuals (13,000 WGS and 64.3K exomes).

• The number of variants in Kaviar grew 169 M SNVs and 48 M indels and substitutions.

• We provide downloads in VCF format, with pre-computed integrated allele frequencies, at http://db.systemsbiology.net/kaviar/Kaviar.downloads.html

• We support human genome references GRCh38, GRCh37 and GRCh36 (hg38, hg19 and hg18).