Hi Nate,
You have several options for replacing the audio track in an existing 360VR video.
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If the final rendered video is a 360VR movie you can use the free Spatial Media Injector app on this GitHub repository to tag the MP4/MOV file as a panoramic movie:
https://github.com/google/spatial-media/releases
If the final rendered movie is a VR180 movie you can download an archived version of the (now discontinued) Google 180VR Creator app and use it to tag the video as a 180VR movie:
https://www.steakunderwater.com/wesuckless/viewtopic.php?p=41898#p41898
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When editing your footage you can choose your preferred workflow:
If you don't want any video re-encoding steps to happen on the video track then the free ffmpeg utility could be used for the task.
ffmpeg can be told to directly copy the existing video track over, and then a modified audio track can be inserted into the new MP4 video file.
This revised MP4 video would then have the 360VR Spatial Media Metadata tags injected back into it.
This is an attractive option if you have a 5.7K video and are using Resolve (Free) or a DAW (an audio editing tool) to edit just the audio track.
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If you are comfortable with Resolve/Resolve Studio for video and audio editing you would edit the 360VR content in a "full-frame" fashion. You would ideally work at the original video resolution and frame rate. No reframing effects would be applied.
The edited video would then be exported via the Resolve Deliver page.
This video file could be encoded by Resolve to an MP4 directly with either an H.264 or H.265 video codec. Your GPU might be able to help accelerate the video encoding task if it supports hardware encoding options.
If video quality mattered a whole lot, you could optionally use a 3rd party video encoding tool like the free Handbrake program to encode the MP4 video from an intermediate DNxHR or ProRes video export if you are tech savvy and want to go the extra mile.
This revised MP4 video would then have the 360VR Spatial Media Metadata tags injected back into it.
Regards,
Andrew Hazelden