kallisto 0.43.0 released

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Páll Melsted

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Jun 2, 2016, 6:13:38 PM6/2/16
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A new release of kallisto is available adding strand specific quantification and UMI processing for single cell reads. 

You can find the release notes and binaries at

https://github.com/pachterlab/kallisto/releases/tag/v0.43.0

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Changes from v0.42.5
quant mode:

Quantification can now be run in strand specific mode. The experiment can either be --fr-stranded, when the first read is on the forward strand or --rf-stranded when the first read is on the second strand.

pseudo mode:

- Improved multithreading when working with single cell data.
- A new UMI mode has been added which allows for efficient processing of UMI labelled single cell data.
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