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dir : /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn
Train-set : /home/user/1111/kaldi/data-fmllr/kaldi/System1/train '10875'
LOG ([5.3.24~1-c948]:main():cuda-gpu-available.cc:49)
### IS CUDA GPU AVAILABLE? 'marius' ###
### CUDA WAS NOT COMPILED IN! ###
To support CUDA, you must run 'configure' on a machine that has the CUDA compiler 'nvcc' available.# Accounting: time=1 threads=1
# Ended (code 1) at Fri Dec 29 16:04:53 CET 2017, elapsed time 1 seconds
queue.pl: Error submitting jobs to queue (return status was 32512)
queue log file is /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/q/pretrain_dbn.log, command was qsub -v PATH -cwd -S /bin/bash -j y -l arch=*64* -o /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/q/pretrain_dbn.log -l gpu=1 -q g.q /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/q/pretrain_dbn.sh >>/home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/q/pretrain_dbn.log 2>&1
Output of qsub was: sh: 1: qsub: not found
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ln: failed to create symbolic link 'links/??-?.?': File exists
ln: failed to create symbolic link 'links/??-??.?': File exists
wsj_data_prep.sh: Spot check of command line arguments failed
Command line arguments must be absolute pathnames to WSJ directories
with names like 11-13.1.
Note: if you have old-style WSJ distribution,
local/cstr_wsj_data_prep.sh may work instead, see run.sh for example.
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queue.pl: Error submitting jobs to queue (return status was 256)
queue log file is /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/q/pretrain_dbn.log, command was qsub -v PATH -cwd -S /bin/bash -j y -l arch=*64* -o /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/q/pretrain_dbn.log /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/q/pretrain_dbn.sh >>/home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/q/pretrain_dbn.log 2>&1
Output of qsub was: Unable to run job: job rejected: your user id 0 is lower than minimum user id 1000 of cluster configuration
warning: root's job is not allowed to run in any queue
Exiting.
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queue log file is /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/q/pretrain_dbn.log, command was qsub -v PATH -cwd -S /bin/bash -j y -l arch=*64* -o /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/q/pretrain_dbn.log /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/q/pretrain_dbn.sh >>/home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/q/pretrain_dbn.log 2>&1
Output of qsub was: Unable to run job: warning: root's job is not allowed to run in any queue
Your job 9 ("pretrain_dbn.sh") has been submitted
Exiting.
job-ID prior name user state submit/start at queue slots ja-task-ID
-----------------------------------------------------------------------------------------------------------------
8 0.75000 pretrain_d root qw 01/02/2018 12:47:47 1
9 0.25000 pretrain_d root qw 01/02/2018 12:53:33 1
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queue.pl: Error submitting jobs to queue (return status was 256)
queue log file is /home/user/1111/kaldi/data-fmllr/kaldi/System1/test/q/make_fmllr_feats.log, command was qsub -v PATH -cwd -S /bin/bash -j y -l arch=*64* -o /home/user/1111/kaldi/data-fmllr/kaldi/System1/test/q/make_fmllr_feats.log -t 1:2 /home/user/1111/kaldi/data-fmllr/kaldi/System1/test/q/make_fmllr_feats.sh >>/home/user/1111/kaldi/data-fmllr/kaldi/System1/test/q/make_fmllr_feats.log 2>&1
Output of qsub was: Unable to run job: warning: yonasd's job is not allowed to run in any queue
Your job-array 12.1-2:1 ("make_fmllr_feats.sh") has been submitted
Exiting.
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root
sgeadmin
yonasd
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Job 32 (-l arch=*64*) cannot run in queue "all.q@marius" because job requests unknown resource (arch)
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/home/user/1111/kaldi-trunk/kaldi/egs/wsj/s5/steps/nnet/make_fmllr_feats.sh: feature type is lda_fmllr
/home/user/1111/kaldi-trunk/kaldi/egs/wsj/s5/utils/copy_data_dir.sh: copied data from data/test to /home/user/1111/kaldi/data-fmllr/kaldi/System1/test
Checking /home/user/1111/kaldi/data-fmllr/kaldi/System1/test/text ...
--> reading /home/user/1111/kaldi/data-fmllr/kaldi/System1/test/text
--> text seems to be UTF-8 or ASCII, checking whitespaces
--> text contains only allowed whitespaces
/home/user/1111/kaldi-trunk/kaldi/egs/wsj/s5/utils/validate_data_dir.sh: Successfully validated data-directory /home/user/1111/kaldi/data-fmllr/kaldi/System1/test
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yonasd@marius:~/1111/kaldi/kaldi-script$ ./05_run_dnn.sh
Training .................
# /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn_dnn/log/train_nnet.log /home/user/1111/kaldi-trunk/kaldi/egs/wsj/s5/steps/nnet/train.sh --feature-transform /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/final.feature_transform --dbn /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn/6.dbn --hid-layers 0 --learn-rate 0.008 /home/user/1111/kaldi/data-fmllr/kaldi/System1//home/user/1111/kaldi/data/train_tr90 /home/user/1111/kaldi/data-fmllr/kaldi/System1//home/user/1111/kaldi/data/train_cv10 /home/user/1111/kaldi/lang /home/user/1111/kaldi/exp/System1/tri3b_ali /home/user/1111/kaldi/exp/System1/tri3b_ali /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn_dnn
# Started at Fri Jan 12 01:21:46 CET 2018
#
bash: line 1: /home/user/1111/kaldi/exp/System1/dnn4b_pretrain-dbn_dnn/log/train_nnet.log: Text file busy
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Configuring ...
Checking compiler clang++-3.8 ...
Checking OpenFst library in /home/yonasd/1111/kaldi-trunk/kaldi/tools/openfst ...
Doing OS specific configurations ...
On Linux: Checking for linear algebra header files ...
Using ATLAS as the linear algebra library.
Successfully configured for Debian/Ubuntu Linux [dynamic libraries] with ATLASLIBS =/usr/lib/libatlas.so.3 /usr/lib/libf77blas.so.3 /usr/lib/libcblas.so.3 /usr/lib/liblapack_atlas.so.3
Using CUDA toolkit /usr/ (nvcc compiler and runtime libraries)
Info: configuring Kaldi not to link with Speex (don't worry, it's only needed if you
intend to use 'compress-uncompress-speex', which is very unlikely)
SUCCESS
To compile: make clean -j; make depend -j; make -j
... or e.g. -j 10, instead of -j, to use a specified number of CPUs
/home/yonasd/1111/kaldi-trunk/kaldi/tools/openfst/include/fst/fst.h:744: undefined reference to `fst::FstHeader::Write(std::ostream&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const'
clang: error: linker command failed with exit code 1 (use -v to see invocation)
<builtin>: recipe for target 'lattice-to-nbest' failed
make[2]: *** [lattice-to-nbest] Error 1
clang: error: linker command failed with exit code 1 (use -v to see invocation)
<builtin>: recipe for target 'lattice-prune' failed
make[2]: *** [lattice-prune] Error 1
make[2]: Leaving directory '/home/yonasd/1111/kaldi-trunk/kaldi/src/latbin'
Makefile:142: recipe for target 'latbin' failed
make[1]: *** [latbin] Error 2
make[1]: Leaving directory '/home/yonasd/1111/kaldi-trunk/kaldi/src'
Makefile:35: recipe for target 'all' failed
make: *** [all] Error 2
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