Can JointSNVMix compare groups?

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tangxj

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Oct 13, 2011, 5:59:32 PM10/13/11
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Hi,

I know that the JointSNVMix are working on tumor and normal pair. But
would it work if I have multiple samples for tumor and normal
respectively, and want to analysis all of them?

Thanks,
tangxj

aroth

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Oct 14, 2011, 12:37:19 PM10/14/11
to JointSNVMix User Group
JointSNVMix only works with a single set of paired samples at this
point. Is you interest in analysing matched tumour/normal samples from
a cohort of patients? Or is it analysing multiple samples taken from a
single patient?

These are both be extensions I could make in the future and I would
interested to know where the demand lies.

Cheers,
Andy
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