TF class / family classification

[Triana Forment]

Hi, 

I'm using JASPAR 2024 to retrieve the TF nature of de novo motifs found on diatom species. I guess you have associated TFBS to TFs, and the best match is retrieved. But I wonder what is the approach to assign a TF to a TF family / class. 

Is it possible to download a table with your classification of TF class and the TF families that belong to those classes? And if you have any InterPro domain / PFAM associated to that classification? It would really help me.

Thank you beforehand, 
Triana

[Triana Forment]

I wonder if JASPAR have any downloadable table with the NAMES of TF families and classes that they use for the associated TFs to the different motifs (TFBS). 

[Anthony Mathelier]

Dear Triana.

You can get such a table using the pyJASPAR python module, the JASPAR2024 Bioconductor package, or the REST API.

Best

AM