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Issue with Installing JASPAR2022 Package

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shuo cao

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Dec 29, 2023, 11:56:14 AM12/29/23
to JASPAR Q&A Forum
Hi there,

I am writing to seek assistance regarding an issue I encountered while attempting to install the JASPAR2022 package using the command BiocManager::install("JASPAR2022").

The error message I received is as follows:

Warning: download failed
  web resource path: ‘https://jaspar.genereg.net/download/database/JASPAR2022.sqlite
  local file path: ‘/.cache/R/BiocFileCache/138cfe7ee6fd2f_JASPAR2022.sqlite’
  reason: Not Found (HTTP 404).


Is there an alternative resource or method to obtain the required file? Thank you. 

Anthony Mathelier

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Jan 17, 2024, 4:35:57 AM1/17/24
to JASPAR Q&A Forum
Thanks for the notification. This is due to the fact that JASPAR is now hosted by ELIXIR. We recommend using the JASPAR 2024 R package.
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