search for collaboration on TFs of juvenile fish brains

[Radka Symonova]

Dear JASPAR community,

since i am totally new in the research of TFs, I would like to find help or ideally co-authors of our arising paper on juvenile pikeperch/Zander brain transcriptomics.

i did RNA-seq from whole-brain of an earlier planktivorous and a later piscivorous phase of the first year pikeperch ontogeny (from 2 years, altogether 12 individuals sequenced) - there are two sets of TFs, each significantly upregulated in the respective phase, they even potentially differ in the types of TFs between the phases (not all yet classified).

unfortunately, i dont know how to obtain the target genes (or their candidates) of these TFs and how to proceed further with the TFs, hence i would welcome any help or ideally a new co-author, who would help me with this part of manuscript. would there be anybody intererested here?

our first paper of this research was published recently https://pubmed.ncbi.nlm.nih.gov/39629900/  and i would like to focus the next one on TFs.

many thanks for considering joining our group

with kind regards from Budweis

Radka Symonova

Assoc. Prof. Radka Symonová, Ph.D.

Institute of Hydrobiology | Biology Centre | Czech Academy of Sciences

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Department of Computer Science | Faculty of Science | University of South Bohemia, České Budějovice/Budweis