Error 127

[etienn...@medportal.ca]

Greetings,

Thanks for your help with my previous compile problems.

I am now faced with another downstream problem:

================================= Stage filter_transcripts [B044] ==================================
Pipeline failed! (2)

Command failed with exit status = 127 :

time --vanilla --args B044_AGTCAA_S1/B044_AGTCAA_S1.psl B044_AGTCAA_S1/B044_AGTCAA_S1.txt 1000 /home/ermahe/bin/JAFFA-version-1.07/hg38_genCode22.tab < /home/ermahe/bin/JAFFA-version-1.07/process_transcriptome_blat_table.R &> B044_AGTCAA_S1/log_filter

Pipeline failed! (2)

One or more parallel stages aborted. The following messages were reported:

Command failed with exit status = 127 :

time --vanilla --args B044_AGTCAA_S1/B044_AGTCAA_S1.psl B044_AGTCAA_S1/B044_AGTCAA_S1.txt 1000 /home/ermahe/bin/JAFFA-version-1.07/hg38_genCode22.tab < /home/ermahe/bin/JAFFA-version-1.07/process_transcriptome_blat_table.R &> B044_AGTCAA_S1/log_filter

======================================== Pipeline Finished =========================================

Have you encountered this type of error? Can you offer any troubleshooting help?

Thanks,

Etienne

[Alberto L'Abbate]

Did you fix the issue?

    Alberto

[Nadia Davidson]

Hi,

I just posted an answer in the previous thread, https://groups.google.com/forum/#!topic/jaffa-project/QphYDc8s09Q

Let us know if it helps you.

Cheers,

Nadia.