TL;DR: java.lang.Long's constructor initWithLong: will be changed to initWithLongLong:.
Explanation:
The java.lang.Long(long) constructor was translated as initWithLong:(jlong), following normal method name mangling. A jlong is equivalent to the Objective C "long long".
The problem is that java.lang.Long extends java.lang.Number, which extends NSNumber, and NSNumber has two initializers: initWithLong:(long) and initWithLongLong:(long long), so these types conflict with the transpiled Java method.
The solution therefore is to generate initWithLongLong:(jlong) init methods for those classes that extend the java.lang.Number(long) constructor. Any native sources with "[[JavaLangLong alloc] initWithLong:nnn]" need to be updated to initWithLongLong:, since Objective-C doesn't have a safe way to alias a method name. References to the related C functions won't have to be changed, though, as we'll provide inlined compatibility functions.