Re: [itksnap-users:1996] Re: Unable to recognize file format or cannot read the image

[Paul Yushkevich]

Hi Ekaterina

If you can secure share an anonymized DICOM or NIFTI file, I might be able to help

Best

Paul

On Wed, Aug 24, 2016 at 7:33 AM, Ekaterina Stupina <ek.st...@gmail.com> wrote:

I also tried to play with nifti file. Put the image to acpc plane, coregistered with mni template and resliced it but it didn't help.

On Wednesday, August 24, 2016 at 2:10:21 PM UTC+3, Ekaterina Stupina wrote:

Hi, I have a problem opening a file for one particular patient!

I got DICOM files. My colleague can open them as a dicom series in itk-snap on Mac without any problems but for me (on Windows) it keeps saying "Unable to recognize format". We have the same latest version of itk-snap (but I also reinstalled itk-snap, just in case).

I converted dicom files to nifti with spm package and with mricron util but can't open the resulting files either: "Error: wrong format. The IO library for the format NIFTI cannot read the image file". However, I can open them in mricron. What can be the problem? And how can I fix it?

I never had such problems with itk-snap before.

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Paul A. Yushkevich, Ph.D.
Associate Professor
Penn Image Computing and Science Laboratory
Department of Radiology
University of Pennsylvania