Trouble launching IsoNet2 GUI

[Erich Raumann]

Hello,

I'm trying to use and install IsoNet2 on a Ubuntu machine. I'm able to setup the CLI by following the documentation, but the GUI does not work. When I type IsoNet2 into terminal per the documentation, it says there is no such command. I can launch the GUI by running "isoapp" from the unpacked appimage, but when I do so there are no conda environments available for me to select in the settings, no matter what install path I put. 

Any help would be greatly appreciated. I apologize if this is a trivial question or too vague, I am new to Linux. 

Erich Raumann

Kaplan lab, University of Chicago

[YUNTAO LIU]

Hi Erich,

The isoapp is simply an executable. You can try 'chmod +x isoapp-1.0.0.AppImage' and ',./isoapp-1.0.0.AppImage'

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Best Regards,

Yuntao Liu,  Postdoc.

California NanoSystem Institute

University of California Los Angeles

[Erich Raumann]

Hey,

Thank you so much! After installing a legacy version of FUSE, this works. However, I'm still running into the same error. When I try to do anything in the GUI, I am met with "Isonet.py: command not found", even with the conda environment set to isonet2_environment and the installation path to where I unzipped and installed the IsoNet2 files from the github release. 

If you could give me some ideas on what I am still doing wrong, I would be very grateful.

Erich Raumann

[Erich Raumann]

Hey,

Never mind. solved this by using the most up to date IsoNet2 files from the github as opposed to the ones in the release

Erich