hi Anne-Cecile,
40000 is the default maximum node number we allow cgalsurf to
produce. you are getting 40000 nodes yet still have a coarse mesh
indicates that you are running into a known convergence issue for
at least the older versions of CGAL - I am not sure if this has
been fixed. A list of documented discussions on this can be found
at
https://github.com/fangq/iso2mesh/issues/5
basically when there are so called "non-manifold" structures at your chosen threadhold, cgal could get trapped in an infinite refinement loop, causing it to create extremely dense spots while not meshing other areas evenly.
you can change your thread-hod slightly, for example, instead of 0.5, give it 0.51, or 0.6 and see if it can get out of the infinite refinement loop
you can set the maxnode limit to a higher number, it it won't
help you because it will continue refining the local area until
the new limit is reached
https://github.com/fangq/iso2mesh/blob/master/vol2surf.m#L27
Qianqian
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