iRODS server failed to start.

[Marcel Malet]

Hi All

I have iRODS 4.0.3

Month ago I was able to configure and start the server successfully and execute commands. But now I try to start the server and I get the "iRODS server failed to start"

In logs file I don't have new messages (in /var/lib/irods/iRODS/server/log).

In /var/log/messages I got:

irodsServer[11046]: segfault at 40 ip 000000000052b23e sp 00007fff369b0260 error 4 in irodsServer[400000+4a5000]

looks bad... :(

The postgresql is running.

also get errors like this (obious because the server is down..):

ERROR: _rcConnect: connectToRhost error, server on opesudat02.bsc.es:1247 is probably down status = -305111 USER_SOCK_CONNECT_ERR, Connection refused

where can I get more logs to figure out what is happening? what can i do?

thanks in advance.

[Terrell Russell]

Hi Marcel,

I think you said this, but want to confirm...

Is there anything in the /var/lib/irods/iRODS/server/log/rodsLog.* file(s)?

Can you make sure there are no other irodsServer or related processes running?

If you're still testing/configuring, I suggest beginning again with 4.1.8.

Terrell

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[Marcel Malet]

Hi Terrell

There is no other process running.

I found logs in an old log file in /server/log, (I looked only into the newest file...) I see this:

Dec 4 14:31:21 pid:3431 ERROR: cllConnect: SQLConnect failed: -1
Dec 4 14:31:21 pid:3431 ERROR: cllConnect: SQLConnect failed:odbcEntry=postgres,user=irods,pass=XXXXX
Dec 4 14:31:21 pid:3431 ERROR: cllConnect: SQLSTATE: S1000
Dec 4 14:31:21 pid:3431 ERROR: cllConnect: Native Error Code: 101
Dec 4 14:31:21 pid:3431 ERROR: cllConnect: [unixODBC]Could not connect to the server;
Could not connect to remote socket.
Dec 4 14:31:21 pid:3431 NOTICE: _rsGenQuery: genQuery status = -824000
Dec 4 14:31:21 pid:3431 NOTICE: rsGenQuery: rcGenQuery failed, status = -824000
Dec 4 14:31:21 pid:3431 NOTICE: initZone: rsGenQuery error, status = -824000
Dec 4 14:31:21 pid:3431 SYSTEM FATAL: initServerInfo: initZone error, status = -824000
Dec 4 14:31:21 pid:3431 NOTICE: initServer: initServerInfo error, status = -824000
Dec 4 14:31:21 pid:3431 ERROR: initServerMain: initServer error. status = -824000


thanks!

[Marcel Malet]

Also I have this error:

pid:20373 ERROR: queZone: Bad input portNum 0 for
LocalHostName:

[Terrell Russell]

Can you confirm your database credentials and connection are good - outside of iRODS (just use psql)?

If the database is not available, nothing will come up.

Terrell

[Marcel Malet]

Hi Terrell

I confirm the database looks good. I executed setup_irods_database.sh and this is the output

Stopping iRODS server...
Found 0 processes:
There are no iRODS servers running.

-----------------------------
Running irods_setup.pl...

Step 1 of 5: Configuring database user...
Updating user's .pgpass...
Skipped. File already uptodate.

Step 2 of 5: Creating database and tables...
Checking whether iCAT database exists...
[ICAT] on [84.88.52.137] found.
Updating Postgres UNIX ODBC odbc.ini configuration...
Updating user's .odbc.ini...
Creating iCAT tables...
Skipped. Tables already created.

Step 3 of 5: Configuring database security...
Configuring security...
Skipped. Existing Postgres configured by DBA.
Testing database communications...

Step 4 of 5: Configuring iRODS server...
Updating iRODS server.config...
Starting iRODS server with boot environment...
Could not start iRODS server.
Starting iRODS server...
iRODS server failed to start.


Install problem:
Cannot start iRODS server.

If your network environment is unusual, you may need to update the
server/config/irodsHost.
Found 0 processes:
There are no iRODS servers running.

Abort.

[Marcel Malet]

Hi Terrell

The issue is solved, I reinstalled the postgres... thanks!

[Terrell Russell]

Excellent.

I notice that the setup sequence mentions the boot environment. This means you're still on 4.0.3 - you'll be much happier with 4.1.8.

Terrell