iRefIndex beta 8.0 available.

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Sabry

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Jan 24, 2011, 12:51:15 PM1/24/11
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Dear iRefIndex users,

iRefIndex beta8.0 is now available.This release was compiled in
December-2010 using most recent source interaction and protein
sequence
databases present at that time.
See:
http://irefindex.uio.no/wiki/Sources_iRefIndex_8.0
for details.

Major changes in this release includes;

1. Default file format for distribution is PSI-MI TAB 2.6

2. All data listed in the source page available for download via our
ftp site (ftp://ftp.no.embnet.org/irefindex/data/).

Sources used:
http://irefindex.uio.no/wiki/Sources_iRefIndex_8.0

Statistics for the full release: http://irefindex.uio.no/wiki/Statistics_iRefIndex_8.0

Readme for the evidence-centric PSI-MI TAB 2.6 files
http://irefindex.uio.no/wiki/README_MITAB2.6_for_iRefIndex_8.0

We have also updated the protein identifier mapping to ROGID and
cROGID and have made available as a downloadable file. More
information available from http://irefindex.uio.no/wiki/Protein_identifier_mapping.

We have updated the psicquic web-service:

http://biotin.uio.no:8080/psicquic-ws/webservices

iRefScape users can update to the new version using the Wizard->check
for updates->update data option. Users who install iRefScape for the
first time in Cytoscape 2.7 will automatically get the new data. We
are working on a version of iRefScape for Cytoscape 2.8 and this will
be made available soon.

iRefWeb (http://wodaklab.org/iRefWeb/) public version is still on
beta7 but this will be upgraded to beta 8 very soon as well.


Regards,
iRefIndex team
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