iRefIndex 14 is now ready

13 views
Skip to first unread message

Ian Donaldson

unread,
Apr 23, 2015, 10:09:38 AM4/23/15
to iref...@googlegroups.com
iRefIndex 14 can now be downloaded from http://irefindex.org

This public distribution includes data consolidated using the iRefIndex method for BIND, BioGRID, CORUM, DIP, IntAct, HPRD, MATRIXDB, MPACT, MPPI and MPIDB. MINT is now included in IntAct.

BIND_TRANSLATION, and INNATEDB are not included due to mapping problems during the build process. These may be returned in a later release. OPHID is permanently removed.

An extended version is available only to clients of Donaldson Research and includes new data sources: INTACT COMPLEXES, I2D_IMEX, REACTOME, SPIKE, VIRUSHOST, UNIPROT, HPIDB, MOLCON, BHF_UCL and MBINFO. If you are interested in working with these data in the context of iRefIndex, please contact i...@donaldsonresearch.com.

All of these resources have been integrated from freely available sources. See the sources links below for details.

Integer identifiers for interactors and interactions are only applicable to the current release - they cannot be used to find an interactor or interaction n a previous release. These integer identifiers include irogida, irogidb, irigid, icrogida, icrogidb and icrigid.

The extended version of release 14.0 contains 231,324 new distinct interaction records since release 13.0

Best regards
Ian
Reply all
Reply to author
Forward
0 new messages