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IQ-TREE
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iqtree2/discussions
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Gabriel DUPRE
,
Minh Bui
3
5/27/20
Q&A
Question about an error message with a tree topology test, -au command and bp-RELL
Hi Minh, Thank you very much for your answer. Cheers Gabriel Le jeudi 7 mai 2020 02:36:09 UTC+2, Minh
unread,
AU_test
BUG
Info
error
topology
tree
Q&A
Question about an error message with a tree topology test, -au command and bp-RELL
Hi Minh, Thank you very much for your answer. Cheers Gabriel Le jeudi 7 mai 2020 02:36:09 UTC+2, Minh
5/27/20
Moisès Gil i Bernabeu
, …
Brian Foley
6
12/14/19
Q&A
MODEL TREES
The HIV Databases also has an IQtree version so you can run IQtree there and at the bottom of the
unread,
ModelFinder
topology
Q&A
MODEL TREES
The HIV Databases also has an IQtree version so you can run IQtree there and at the bottom of the
12/14/19
Shenya
,
Bui Quang Minh
2
4/23/19
Q&A
Is it possible to use IQTREE to compare different gene tree topologies using AU/SH test ?
Hi, You will need to download and use the command line binary. Please have a look at: http://www.
unread,
Answered
iqtree
test
topology
Q&A
Is it possible to use IQTREE to compare different gene tree topologies using AU/SH test ?
Hi, You will need to download and use the command line binary. Please have a look at: http://www.
4/23/19
Andrew Swafford
, …
Minh Bui
7
11/11/19
Q&A
How to bootstrap branch lengths on fixed topology?
I see it now. Then you can put the label directly on to your original tree file, making sure that the
unread,
Answered
Bootstrap
branch
iqtree
topology
Q&A
How to bootstrap branch lengths on fixed topology?
I see it now. Then you can put the label directly on to your original tree file, making sure that the
11/11/19
edmu...@gmail.com
, …
Conrad van den Ende
3
4/18/19
Q&A
BUG - constraint tree ERROR
Hi Minh, Thanks yes it was a problem with the nexus file. Some characters were ambiguous (one species
unread,
Answered
BUG
error
topology
Q&A
BUG - constraint tree ERROR
Hi Minh, Thanks yes it was a problem with the nexus file. Some characters were ambiguous (one species
4/18/19
Dan Proud
, …
Minh Bui
8
1/31/19
Q&A
Approximately Unbiased test returns p-value of 1.0 while other tests are significant
Hi Karen again, Yes this problem with v1.6.8 was fixed in v1.6.9, see the release note: http://www.
unread,
AU_test
Resolved
likelihood
topology
user_trees
Q&A
Approximately Unbiased test returns p-value of 1.0 while other tests are significant
Hi Karen again, Yes this problem with v1.6.8 was fixed in v1.6.9, see the release note: http://www.
1/31/19
Connor French
,
Bui Quang Minh
5
1/31/18
Q&A
AU test: A taxon has no name
Hello Minh, Thank you very much for working through this with me! No problems after the correction.
unread,
AU_test
Resolved
error
topology
Q&A
AU test: A taxon has no name
Hello Minh, Thank you very much for working through this with me! No problems after the correction.
1/31/18
Michal Motyka
,
Bui Quang Minh
2
11/1/17
Q&A
Constrained topology
Hi Michal, The command line looks OK. However, it's hard to help here without looking at the
unread,
IQtreeErrors
Noresponse
topology
user_trees
Q&A
Constrained topology
Hi Michal, The command line looks OK. However, it's hard to help here without looking at the
11/1/17
Mark
,
Bui Quang Minh
2
7/14/17
Q&A
Morphological tree search
Dear Mark, This sounds like your alignment does not have enough phylogenetic signals … What is the
unread,
Answered
morphological
morphology
topology
Q&A
Morphological tree search
Dear Mark, This sounds like your alignment does not have enough phylogenetic signals … What is the
7/14/17
Max Schön
, …
Minh Bui
6
7/9/18
Q&A
iqtree crashes when using ultrafast bootstraps and tree topology contraint
Dear Swati, I believe such “old" problem has been resolved. So before we can provide further
unread,
BUG
IQtreeErrors
Resolved
topology
Q&A
iqtree crashes when using ultrafast bootstraps and tree topology contraint
Dear Swati, I believe such “old" problem has been resolved. So before we can provide further
7/9/18
Filipe Romero
,
Bui Quang Minh
3
4/27/17
Q&A
Problem with partitioned analysis.
Thank you, Minh! Em quinta-feira, 27 de abril de 2017 09:48:27 UTC-3, Bui Quang Minh escreveu: Hi
unread,
BUG
Partition
branch
topology
Q&A
Problem with partitioned analysis.
Thank you, Minh! Em quinta-feira, 27 de abril de 2017 09:48:27 UTC-3, Bui Quang Minh escreveu: Hi
4/27/17