no recommendations showing in new project

2 views
Skip to first unread message

Andreas Zankl

unread,
Jul 25, 2026, 8:49:26 PM (10 days ago) Jul 25
to incepti...@googlegroups.com
HI Richard,

I have started a new project in which we will use Inception to annotate descriptions of animals with rare diseases (from the OMIA database) with the uPheno2 ontology (a cross-species phenotype ontology). I imported the upheno-basic.owl file (from https://github.com/obophenotype/upheno/releases/tag/v2025-10-12) into Inception as a knowledge base. I can search the knowledgebase and I can assign terms manually in the annotation view, but I dont seem to get any recommendations from the Named Entity Linker Recommender. I only have annotated 2 short texts with it, does it take a while (i.e. more annotations) before the recommender kicks in or am I doing something wrong? The screenshot shows an example, I hoped the recommender would pick up ‘muscle tissue atrophy’ as a suggestion for ‘muscular atrophy’.

Thanks
Andreas

CleanShot 2026-07-26 at 10.47.02@2x.png

Andreas Zankl

unread,
Jul 27, 2026, 7:25:22 AM (9 days ago) Jul 27
to incepti...@googlegroups.com
Annotated some more text and now the recommendations are working. All good!
A

richard...@gmail.com

unread,
Aug 1, 2026, 4:54:55 AM (4 days ago) Aug 1
to incepti...@googlegroups.com, incepti...@googlegroups.com
Good it fixed itself :)

Richard

Sent from my mobile, sorry for brevity.
Reply all
Reply to author
Forward
0 new messages