iLincs

Just wanted to let you know that you sent this to a wrong email address. ilincs team. On Sun, Feb 8,

Hi Ananya, The problem that you encountered is fixed now. Thanks again for alerting us to it and let

Hi Ammar, Sorry for the slow follow up. iLINCS at this point does not provide bulk download of all

Dear iLINCS Team, I hope this email finds you well. My name is Dr. Ammar Elmezayen, and I'm a

Hi Cameron, I'm curious where did you see the documentation for the endpoints you mentioned (eg /

Hi Inês, Thanks for getting in touch -- we currently don't have a commercial license. Please

Please let us know if you are still experiencing issues. Thanks, Michal On Monday, May 1, 2023 at 1:

Hi Amy, Thanks for getting in touch. We recently switched from http:// to https:// -- could you

Hello! We have being trying to submit a gene list for a signature enrichment (http://www.ilincs.org/

Hello, I am emailing in regards to a question about iLINCS datasets. What methods are used to achieve

I created a signature based on ER status from the TCGA_BRCA_RNASeqV2 dataset. http://www.ilincs.org/

Hi Peter, Not sure what went wrong with your analysis. iLINCS API and UIs should generally give

Hello, I am really sorry the slow followup. We have had troubles with maintaining the Java TreeView

Hi Eamon, The enrichment results (z-scores) are based on two-tailed p-values of expression changes of

Hello, I am really sorry about this. We have had troubles with maintaining the Java TreeView

Hello, iLINCS contains original LINCS project L1000 signatures released through GEO and does not

Hi Andrea, The data should still be downloaded from LINCS LDP (https://lincsportal.ccs.miami.edu/dcic

For specific questions regarding NeuroLINCS project and data please refer to their web page: http://

I am sorry for the slow reply - had some technical issues with my gmail. Could you be a little more

Hi Mike, I'm not sure if you have figured this out yet, but here is the answer: yes, there should

Hello Haln, I checked all upload functionalities and they seem to be working fine. Would you mine

Hello Abdul, Please correct me if I am wrong, but looks like you are trying to use a system (

Dear Elahe, Unfortunately the CCLE dataset, to the best of my knowledge, does not contain “normal

This answer might help you (look for "Signature Upload Error" in google group) Signature

Dear Charlotte, I apologize for belated reply. For some reason I missed your message. iLINCS

Hi Josh, We went through all steps that you outlined, including submission of the file you shared and

Hello ilincs.org Team, Hope you are doing great. I feel so curious to know your thought and help you

Dear Yoyana, At this moment iLINCS does not facilitate download of the whole collection of signatures

Dear Hendrik, You are correct about the ordering of the "Treatment" and "control"

Hi Xiangyu, There are two options you can download signature data from ilincs. 1- From ilincs website