run IGV on linux terminal

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kathr...@gmail.com

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Aug 21, 2014, 9:38:40 AM8/21/14
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I am currently running IGV on linux terminal. It works fine but have one question and would like to have your advice. While uploading the big files, there usually the message indicating the memory is low and the rest of the read stopped being read into igv afterwards. I know it was operated behind by igv.jar. Is there any way that I can define the memory while invoking “sh igv.sh” in command line? Thanks.

Jim Robinson

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Aug 21, 2014, 9:57:16 AM8/21/14
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Yes, look at the readme file in the distribution, or the documentation online, it will tell you how.

I am currently running IGV on linux terminal. It works fine but have one question and would like to have your advice. While uploading the big files, there usually the message indicating the memory is low and the rest of the read stopped being read into igv afterwards. I know it was operated behind by igv.jar. Is there any way that I can define the memory while invoking “sh igv.sh” in command line? Thanks.

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