read order for IGV

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jianfen man

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Mar 29, 2026, 10:40:52 PMMar 29

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Hi，I have sample with Tandem Repeat of DMD Exon51-55 by TRS . There are some Reverse Strand Reads conver the breakpoint. When I use IGV for check the breakpoint,I get 'read order' by IGV.I want to known the mean of ' read order ', especially for Reverse Strand Reads.

Thank you.

jianfen man

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Mar 30, 2026, 2:42:30 AMMar 30

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And I want to know the diffence between Read Order and Alignment order.

Thank you.

jianfen man

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Mar 30, 2026, 2:46:51 AMMar 30

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