SNP / How to see if a mutation is silencious or not?

[annesophi...@gmail.com]

 

Hello,

I'm using IGV to interpret some viral genome New Generation Sequencing data.

 

How can I easily see whether a mutation is silencious or has an impact on proteic sequence? I didn't find the answer on user guide.

 

Concerning SNP, is it possible to export in an excel table all data from consensus sequence with percentages of variability and localisation in reference genome?

 

Thanks in advance for your answer,

Best regards,

Dr Anne-Sophie L'Honneur