where are they now?

[AP]

Hi,

Can you please let us know the new location for fasta files at this location?

http://igvdata.broadinstitute.org/genomes/seq/NC_007605/NC_007605.fasta

[igv-help]

Can we ask why you are asking?  And if it's for IGV what version of IGV are you using.  

[AP]

We are using 2.19. We have created custom genome tracks using above references. It looks like they do not exist any more. I am wondering if they were hosted on standard site where IGV hosts genomes.

Thank you!

[James Robinson]

We do not host that fasta file, newer versions of IGV (2.19.X) use ".2bit" references by default which are hosted at UCSC.   I've attached a genome json file for that assembly,  you can use it as is or edit it to customize it.   If you want a fasta file for some other purpose you can convert the ".2bit" file to fasta using tools from UCSC.   The 2bit file can be downloaded from https://hgdownload.soe.ucsc.edu/hubs/GCF/002/402/265/GCF_002402265.1/GCF_002402265.1.2bit.

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