Hi,
I used to right click at the left of the coverage track and use "Copy details to clipboard" to get a count matrix for all the bases in my sequence. I haven't used the feature in a while, but now I can't manage to replicate the feature. When clicking in a particular base I get the details of that position, but when I click on the whole track as the option is grayed out.
I don't know if it's an issue with my files or the program. If the feature is no longer available, i would appreciate some alternatives. I used this matrix as the input for sequence logos.
I tried everything i could think and can't get the button to become available. These are the files I am using. It's a simple alingment to a short reference sequence. Tried with igv 2.12.0 and 2.17.4.