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Malthe Brændholt Sørensen
Jul 11
Group level nets
Hi all, First of all, I want to express my gratitude for the IDTxl software package. I am trying to
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Group level nets
Hi all, First of all, I want to express my gratitude for the IDTxl software package. I am trying to
Jul 11
Jules Mitchell
Mar 11
PBS Scripting
Hi all, I plan (when v1.6 is released) to conduct a multivariate TE analysis of resting state EEG
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PBS Scripting
Hi all, I plan (when v1.6 is released) to conduct a multivariate TE analysis of resting state EEG
Mar 11
Kayson Fakhar
, …
Jules Mitchell
4
Feb 15
TE values as an adjacency matrix?
Hi Jules, That would be great because I got slowed down by wrapping up my PhD thesis. On Thu, Feb 15,
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TE values as an adjacency matrix?
Hi Jules, That would be great because I got slowed down by wrapping up my PhD thesis. On Thu, Feb 15,
Feb 15
Debashis Das Chakladar
Feb 10
Issue in MTE graph generation in version 1.5.1
Hi, I built the Multivariate Transfer Entropy (MTE) graph using IDTxl last year Jan. But when I try
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Issue in MTE graph generation in version 1.5.1
Hi, I built the Multivariate Transfer Entropy (MTE) graph using IDTxl last year Jan. But when I try
Feb 10
michael...@web.de
Jan 30
Alert: Two critical bugs found in the stats module of IDTxl
Dear IDTxl users, unfortunately we found two bugs in the statistics module of our toolbox. These bugs
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Alert: Two critical bugs found in the stats module of IDTxl
Dear IDTxl users, unfortunately we found two bugs in the statistics module of our toolbox. These bugs
Jan 30
Yorgo Hoebeke
12/12/23
mTE conditioning on participants and time of day
Dear all, Thank you again for creating IDTxl. I used MTE and AIS to study psychological time series
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mTE conditioning on participants and time of day
Dear all, Thank you again for creating IDTxl. I used MTE and AIS to study psychological time series
12/12/23
Thomas Varley
,
p.wol...@gmail.com
2
9/17/23
Multivariate MI, adding conditionals error
Hi Thomas, this comes a bit late, but maybe it is still useful to you or others: The implementation
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Multivariate MI, adding conditionals error
Hi Thomas, this comes a bit late, but maybe it is still useful to you or others: The implementation
9/17/23
Kate Dembny
,
p.wol...@gmail.com
2
9/17/23
MI vs TE in IDTxl
Hi Kate, Your understanding is correct, both with regards to the difference between TE and MI, and
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MI vs TE in IDTxl
Hi Kate, Your understanding is correct, both with regards to the difference between TE and MI, and
9/17/23
Yorgo Hoebeke
, …
Joseph Lizier
5
7/26/23
How to discussion the nature (e.g., positive or negative) of associations of transfer entropy
Thanks a lot for your answers! And thank you for the references. In this paper, I went for simple
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How to discussion the nature (e.g., positive or negative) of associations of transfer entropy
Thanks a lot for your answers! And thank you for the references. In this paper, I went for simple
7/26/23
Oleg Kachan
,
Thomas Varley
2
7/5/23
Can I compute total correlation with IDTxl?
For interested readers, Ryan James' Discrete Information Toolbox (DIT) will do TC, DTC, and a
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Can I compute total correlation with IDTxl?
For interested readers, Ryan James' Discrete Information Toolbox (DIT) will do TC, DTC, and a
7/5/23
Bernadetta Pitkin
5/26/23
Inquiry about WARNING and replication parameter in idtxl
Dear idtxl Team, I hope this email finds you well. I am a user of the idtxl and have encountered a
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Inquiry about WARNING and replication parameter in idtxl
Dear idtxl Team, I hope this email finds you well. I am a user of the idtxl and have encountered a
5/26/23
Luca Castri
, …
Yorgo Hoebeke
6
12/15/22
Auto-dependency
Hi Patricia, I hadn't noticed the seed argument! Thanks for pointing it out; I will follow your
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Auto-dependency
Hi Patricia, I hadn't noticed the seed argument! Thanks for pointing it out; I will follow your
12/15/22
Juan Pablo Fiorenza
2
11/29/22
Stacked of local AIS values.
Hi everyone, After looking deeply in my code, I noted that the local estimation is performed using
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Stacked of local AIS values.
Hi everyone, After looking deeply in my code, I noted that the local estimation is performed using
11/29/22
Navid Parviny
,
p.wol...@gmail.com
2
11/28/22
Inferring TE values in financial markets
Hi, I would suggest to do some introductory reading on the mutual information (as transfer entropy is
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Inferring TE values in financial markets
Hi, I would suggest to do some introductory reading on the mutual information (as transfer entropy is
11/28/22
Daniele
9/9/22
Max_lag source/target interpretation
Hi all, I'm computing the TE between two time series (mainly looking at the omnibus value) with a
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Max_lag source/target interpretation
Hi all, I'm computing the TE between two time series (mainly looking at the omnibus value) with a
9/9/22
Daniele
,
p.wol...@gmail.com
2
3/27/22
Number of permutations
Hi Daniele, glad to hear, the documentation helps. The number of permutations is used in IDTxl's
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Number of permutations
Hi Daniele, glad to hear, the documentation helps. The number of permutations is used in IDTxl's
3/27/22
Adam W
,
Joseph Lizier
2
10/19/21
Inferring networks in the presence of stimulation / intervention
Hi Adam, I can't think of examples where people have done this off-hand, but it seems fine enough
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Inferring networks in the presence of stimulation / intervention
Hi Adam, I can't think of examples where people have done this off-hand, but it seems fine enough
10/19/21
Thomas Varley
,
Joseph Lizier
4
9/13/21
Why does JidtDiscreteCMI take so much longer than JidtDiscreteTE
Hi Joe, thanks for the speedy reply - I'll check out working w/ JIDT directly, I'm thinking
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Why does JidtDiscreteCMI take so much longer than JidtDiscreteTE
Hi Joe, thanks for the speedy reply - I'll check out working w/ JIDT directly, I'm thinking
9/13/21
ghz weng
7/15/21
How parameters effect the size of network?
Dear developer, Thanks for your amazing work! I'm not clear how 'n_perm_max_stat', '
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How parameters effect the size of network?
Dear developer, Thanks for your amazing work! I'm not clear how 'n_perm_max_stat', '
7/15/21
ghz weng
,
Joseph Lizier
2
6/1/21
How to speed up mTE?
Hi - this sort of timing is normal, and indeed it's likely to require quite some more time yet.
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How to speed up mTE?
Hi - this sort of timing is normal, and indeed it's likely to require quite some more time yet.
6/1/21
Douglas Hull
, …
Thomas Varley
4
5/13/21
Results Normalization
While we're on this topic - does it make sense to normalize local information values in the same
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Results Normalization
While we're on this topic - does it make sense to normalize local information values in the same
5/13/21
Tanmay Singhal
, …
Joseph Lizier
7
4/26/21
Incorrect results for simulated data
I've just realised that this nonlinear example is basically the well known MUTE example from
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Incorrect results for simulated data
I've just realised that this nonlinear example is basically the well known MUTE example from
4/26/21
Joseph Lizier
4/25/21
Re: Unexpected results while comparing CMI estimators
Hi Valentin, A few points here: 1. "which are normalised and therefore jointly Gaussian" -
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Re: Unexpected results while comparing CMI estimators
Hi Valentin, A few points here: 1. "which are normalised and therefore jointly Gaussian" -
4/25/21
Kayson Fakhar
,
p.wol...@gmail.com
2
3/30/21
A little help with CMI Estimators?
Hi Kayson, you are definitely keeping us busy hunting that OpenCl bug :DI will let you know when I
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A little help with CMI Estimators?
Hi Kayson, you are definitely keeping us busy hunting that OpenCl bug :DI will let you know when I
3/30/21
Douglas Hull
, …
p.wol...@gmail.com
3
3/30/21
Data Intepolation
Hi Joe, Hi Douglas Joe, thanks for answering this. The approach you describe is currently the only
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Data Intepolation
Hi Joe, Hi Douglas Joe, thanks for answering this. The approach you describe is currently the only
3/30/21
Onur Dogan
, …
Joseph Lizier
8
3/27/21
TE value without Statistical Significance Test
Thank you for the explanation, I didn't know I can give more than one condition. I will try JIDT
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TE value without Statistical Significance Test
Thank you for the explanation, I didn't know I can give more than one condition. I will try JIDT
3/27/21
Thomas Varley
,
Joseph Lizier
2
3/21/21
Repeated Overflower Error error using binary transfer entropy inference
Just noting that this is being dealt with on issue #65 --joe On Fri, 19 Mar 2021 at 01:40, Thomas
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Repeated Overflower Error error using binary transfer entropy inference
Just noting that this is being dealt with on issue #65 --joe On Fri, 19 Mar 2021 at 01:40, Thomas
3/21/21
ghz weng
,
p.wol...@gmail.com
2
3/12/21
Is Replication necessary for analys?
Hi, no, replications are not necessary per se. For IDTxl, replications are repetitions of your data
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Is Replication necessary for analys?
Hi, no, replications are not necessary per se. For IDTxl, replications are repetitions of your data
3/12/21
Kayson Fakhar
,
p.wol...@gmail.com
2
3/9/21
No significant links after the package update
Hi Kayson, thanks for bringing this to our attention. Indeed, we worked on the OpenCL code to fix
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No significant links after the package update
Hi Kayson, thanks for bringing this to our attention. Indeed, we worked on the OpenCL code to fix
3/9/21
Valentin RINEAU
,
p.wol...@gmail.com
6
3/4/21
Meaning of "inf" for selected_sources_te and omnibus_te
It is difficult to give a general recommendation on how many samples one needs. This also largely
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Meaning of "inf" for selected_sources_te and omnibus_te
It is difficult to give a general recommendation on how many samples one needs. This also largely
3/4/21