errors in idSocial

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elena.r...@gmail.com

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Jul 27, 2020, 12:51:55 PM7/27/20
to idTracker/idSocial users
So I used idTracker for tracking zebrafish. When I was trying to analyze the data, the "script-based" and GUI-based version of idSocial both produced errors. However, I get those errors also for the output from the example video on the webpage from idTracker.

[idSocial_prepareTrajectories3D] Trajectories are ready! (It took 0.10724 seconds to prepare it)
Index exceeds the number of array elements (4).

Error in idSocial_filters3D (line 302)
            circRoi = (distance_focal_center(:,ff,nf) < filter_focal_circularROI(4)) | (distance_focal_center(:,ff,nf) > filter_focal_circularROI(5));

Error in idSocial_loadData (line 695)
                            tr.trajectory =
                            idSocial_filters3D(tr.trajectory,options{group}{subset}{trial},bodylength,framerate,squeeze(info.circ_roi(group,subset,trial,:)));

Error in prepareTrajectories_WT_N2_MovAvg30 (line 269)
[data, ~, info]=idSocial_loadData(trajectory_location, datosegm_location, options);

Error in Ontogeny_plot_AllFigures (line 189)
        prepareTrajectories_WT_N2_MovAvg30(subdirN2)



In the GUI version I am getting located to line 1856 (in idSocialUI.m) with an "waiting for input" message by Matlab.

    catch
        keyboard
    end



Does anyone get the same errors and knows how to solve this? I am working with Matlab 2020a. So maybe these errors are due to an incompatibility of the versions?
Also, I would be helpful if you have some kind of user guide that explains the single steps in the GUI version, as I am not always sure about parameter settings.


Thanks in advance for your answers and help!


Best,
Elena
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