mzmatch installation error with R 3,1,0

[Nishikant Wase]

Hi 

I am trying to install mzmatch and keep getting this error, does anyone have any idea what is going on?

> require (mzmatch.R)

Loading required package: mzmatch.R

Loading required package: rJava

Loading required package: xcms

Loading required package: mzR

Loading required package: Rcpp

 *** caught segfault ***

address 0x20, cause 'memory not mapped'

Traceback:

 1: .Call(Module__functions_names, xp)

 2: Module(m, pkg, mustStart = TRUE)

 3: doTryCatch(return(expr), name, parentenv, handler)

 4: tryCatchOne(expr, names, parentenv, handlers[[1L]])

 5: tryCatchList(expr, classes, parentenv, handlers)

 6: tryCatch({    mod <- Module(m, pkg, mustStart = TRUE)    if (isTRUE(direct)) {        populate(mod, ns)    }    else {        forceAssignInNamespace(m, mod, ns)    }    assign(.moduleMetaName(m), mod, envir = ns)}, error = function(e) {    stop(sprintf("failed to load module %s from package %s\n%s",         m, pkg, conditionMessage(e)))})

 7: loadRcppModules()

 8: fun(libname, pkgname)

 9: doTryCatch(return(expr), name, parentenv, handler)

10: tryCatchOne(expr, names, parentenv, handlers[[1L]])

11: tryCatchList(expr, classes, parentenv, handlers)

12: tryCatch(fun(libname, pkgname), error = identity)

13: runHook(".onLoad", env, package.lib, package)

14: loadNamespace(package, c(which.lib.loc, lib.loc))

15: doTryCatch(return(expr), name, parentenv, handler)

16: tryCatchOne(expr, names, parentenv, handlers[[1L]])

17: tryCatchList(expr, classes, parentenv, handlers)

18: tryCatch(expr, error = function(e) {    call <- conditionCall(e)    if (!is.null(call)) {        if (identical(call[[1L]], quote(doTryCatch)))             call <- sys.call(-4L)        dcall <- deparse(call)[1L]        prefix <- paste("Error in", dcall, ": ")        LONG <- 75L        msg <- conditionMessage(e)        sm <- strsplit(msg, "\n")[[1L]]        w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")        if (is.na(w))             w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],                 type = "b")        if (w > LONG)             prefix <- paste0(prefix, "\n  ")    }    else prefix <- "Error : "    msg <- paste0(prefix, conditionMessage(e), "\n")    .Internal(seterrmessage(msg[1L]))    if (!silent && identical(getOption("show.error.messages"),         TRUE)) {        cat(msg, file = stderr())        .Internal(printDeferredWarnings())    }    invisible(structure(msg, class = "try-error", condition = e))})

19: try({    ns <- loadNamespace(package, c(which.lib.loc, lib.loc))    env <- attachNamespace(ns, pos = pos, deps)})

20: library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc)

21: .getRequiredPackages2(pkgInfo, quietly = quietly)

22: library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc)

23: .getRequiredPackages2(pkgInfo, quietly = quietly)

24: library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,     warn.conflicts = warn.conflicts, quietly = quietly)

25: doTryCatch(return(expr), name, parentenv, handler)

26: tryCatchOne(expr, names, parentenv, handlers[[1L]])

27: tryCatchList(expr, classes, parentenv, handlers)

28: tryCatch(library(package, lib.loc = lib.loc, character.only = TRUE,     logical.return = TRUE, warn.conflicts = warn.conflicts, quietly = quietly),     error = function(e) e)

29: require(mzmatch.R)

Possible actions:

1: abort (with core dump, if enabled)

2: normal R exit

3: exit R without saving workspace

4: exit R saving workspace

Selection: 

> biocLite(c("lima"))

BioC_mirror: http://bioconductor.org

Using Bioconductor version 2.14 (BiocInstaller 1.14.2), R version

  3.1.0.

Installing package(s) 'lima'

Warning message:

package ‘lima’ is not available (for R version 3.1.0)