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Icy imaging

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Sergio Hernández

1/8/20

XML files in protocols

Hi there is a way to save trackgroups as xml files in protocols?, im able to calculate speed with

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XML files in protocols

Hi there is a way to save trackgroups as xml files in protocols?, im able to calculate speed with

1/8/20

Veijo, Stephane5

4/17/18

Track manager in protocols/batch

Hi Veijo, Thanks for your feedback and remarks :) In fact even if i wrote the "Block"

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Track manager in protocols/batch

Hi Veijo, Thanks for your feedback and remarks :) In fact even if i wrote the "Block"

4/17/18

Juan Ospina, Stephane2

11/3/17

Hi Juan, Depending of your video sequence it might be possible to adapt if observation conditions are

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tracking_generator

Hi Juan, Depending of your video sequence it might be possible to adapt if observation conditions are

11/3/17

Ben Lansdell, … Alexandre Dufour3

3/8/17

Providing input images to "Spot tracking with excel export" protocol in headless mode

Hi Ben, I've updated the documentation on the plugin's web page (thanks to Stephane's

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Providing input images to "Spot tracking with excel export" protocol in headless mode

Hi Ben, I've updated the documentation on the plugin's web page (thanks to Stephane's

3/8/17

Ben Lansdell, Stephane4

2/21/17

Protocols and missing SnakeTracker plugin

Hi, I think the Protocols plugin was trying to reopen old protocols by default for some reason...

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Protocols and missing SnakeTracker plugin

Hi, I think the Protocols plugin was trying to reopen old protocols by default for some reason...

2/21/17

1/18/17

Tracked spots ID

Hi I'm automating my analysis of two-photon T cell tracking, by creating spots from the ROIs of

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Tracked spots ID

Hi I'm automating my analysis of two-photon T cell tracking, by creating spots from the ROIs of

1/18/17

Stephane, … David G10

12/8/16

Spot Tracking finally compatible with Script and Protocols !

Hi David, You cannot import tracks from the XLS output, currently the Track Manager itself does not

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Spot Tracking finally compatible with Script and Protocols !

Hi David, You cannot import tracks from the XLS output, currently the Track Manager itself does not

12/8/16

sara...@gmail.com, Stephane2

9/12/16

Icy Particle tracking benchmark generator - How generate tracks of know Diffusion coefficient

Hi, In fact you have a complete documentation about this plugin here : http://icy.bioimageanalysis.

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Icy Particle tracking benchmark generator - How generate tracks of know Diffusion coefficient

Hi, In fact you have a complete documentation about this plugin here : http://icy.bioimageanalysis.

9/12/16

8/9/16

Co-motion simulation

Hi, I have used your particle tracking benchmark generator with great success however I would like to

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feature-request

Co-motion simulation

Hi, I have used your particle tracking benchmark generator with great success however I would like to

8/9/16

Benjamin Cappe, Alexandre Dufour3

10/21/17

3D+t segmentation

Hi Alexandre, I know that this thread was open long time ago, but I tried analysis using 2D by other

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3D+t segmentation

Hi Alexandre, I know that this thread was open long time ago, but I tried analysis using 2D by other

10/21/17

Melissa Fender, Stephane2

7/19/16

Cell tracking protocol

Hi Melissa, Sorry for not having replied sooner... Just to know, did you find a solution to your

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Cell tracking protocol

Hi Melissa, Sorry for not having replied sooner... Just to know, did you find a solution to your

7/19/16

Bonora Massimo, Alexandre Dufour4

3/3/16

3D Deformation Profiler on Track Manager

Hi Massimo, Typically you can increase execution time by playing with the “contour sampling”, “

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3D Deformation Profiler on Track Manager

Hi Massimo, Typically you can increase execution time by playing with the “contour sampling”, “

3/3/16

Katie Hansel, thibault...@yahoo.fr6

5/20/15

ok, perfect! Cheers, Thibault Le mardi 19 mai 2015 11:36:38 UTC+2, Katie Hansel a écrit : Dear

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ok, perfect! Cheers, Thibault Le mardi 19 mai 2015 11:36:38 UTC+2, Katie Hansel a écrit : Dear

5/20/15

Jizhou LI, Stephane4

3/31/15

Define the motion parameters in ISBI Challenge tracking benchmark generator

You're welcome :) Le mardi 31 mars 2015 10:12:01 UTC+2, Jizhou LI a écrit : Thanks so much,

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tracking_generator

Define the motion parameters in ISBI Challenge tracking benchmark generator

You're welcome :) Le mardi 31 mars 2015 10:12:01 UTC+2, Jizhou LI a écrit : Thanks so much,

3/31/15

Ashwanth Francis, … Alexandre Dufour4

1/14/15

Why does Icy Stall when performing Spot detection?

Hi Stephane and Alexandre, Thank you very much for your suggestions. I will try and adopt it. However

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Why does Icy Stall when performing Spot detection?

Hi Stephane and Alexandre, Thank you very much for your suggestions. I will try and adopt it. However

1/14/15

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