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Icy imaging
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jkm...@gmail.com
,
Stephane
3
4/5/19
Q&A
Bio format error (file serie batch)
Hello ! Thanks for the answer, Attached are the protocols I used (V001 without batch processing). And
unread,
batch
loop
protocols
spot-detector
Q&A
Bio format error (file serie batch)
Hello ! Thanks for the answer, Attached are the protocols I used (V001 without batch processing). And
4/5/19
Juliano Faccioni
,
Stephane
2
11/28/17
Q&A
Counting cell colonies with Icy
Hi, Given your image it's indeed very complicated to correctly count the number of cell. I made
unread,
Icy
ROI
analysis
automation
batch
cell
count
detection
fluorescence
imageJ
Q&A
Counting cell colonies with Icy
Hi, Given your image it's indeed very complicated to correctly count the number of cell. I made
11/28/17
Yasmine Khalil
, …
ferreol...@epfl.ch
16
9/4/17
Q&A
Question about Big Image Processing
Yes, it seems to work :) Thank you Ferréol. Le mercredi 30 août 2017 21:37:48 UTC+2, ferreol...@epfl.
unread,
analysis
batch
bug-report
save
Q&A
Question about Big Image Processing
Yes, it seems to work :) Thank you Ferréol. Le mercredi 30 août 2017 21:37:48 UTC+2, ferreol...@epfl.
9/4/17
Mike Kress
,
Stephane
3
2/21/17
Q&A
Change metadata
Hi stephane, Merci beaucoup. Michel Le 21/02/2017 à 14:56, Stephane a écrit : Hi Michel, I just added
unread,
batch
folder
protocols
Q&A
Change metadata
Hi stephane, Merci beaucoup. Michel Le 21/02/2017 à 14:56, Stephane a écrit : Hi Michel, I just added
2/21/17
Robert Bell
2/9/17
Q&A
Any programmers available to help with project?
I am looking for programmers familiar with Icy or other image processing software for a compensated
unread,
Track
batch
processor
protocols
spot-detector
Q&A
Any programmers available to help with project?
I am looking for programmers familiar with Icy or other image processing software for a compensated
2/9/17
Stephane
, …
David G
10
12/8/16
Announcement
Spot Tracking finally compatible with Script and Protocols !
Hi David, You cannot import tracks from the XLS output, currently the Track Manager itself does not
unread,
batch
protocols
track-manager
tracking
Announcement
Spot Tracking finally compatible with Script and Protocols !
Hi David, You cannot import tracks from the XLS output, currently the Track Manager itself does not
12/8/16
Nicoco
,
Stephane
4
5/3/16
Q&A
Threshold an image, add ROI to another, in javascript
I added the test just as a security but i think you're right, it returns an array of ROI based of
unread,
Javascript
ROI
Thresholder
batch
Q&A
Threshold an image, add ROI to another, in javascript
I added the test just as a security but i think you're right, it returns an array of ROI based of
5/3/16
Nicoco
4/26/16
Q&A
Iterate over a value in a sequence batch file, save results each time
Hello all, Is it possible to iterate over a value in sequence batch file, pass this value to a block,
unread,
batch
protocols
Q&A
Iterate over a value in a sequence batch file, save results each time
Hello all, Is it possible to iterate over a value in sequence batch file, pass this value to a block,
4/26/16
Nicoco
,
Stephane
3
4/26/16
Q&A
"Append file path" removes full path and outputs file name only
Glad you sorted it :) Indeed it's not easy to deal with these Text / File stuff. Depending the
unread,
batch
protocols
Q&A
"Append file path" removes full path and outputs file name only
Glad you sorted it :) Indeed it's not easy to deal with these Text / File stuff. Depending the
4/26/16
Omer Demirel
,
Stephane
2
3/23/16
Q&A
icy features
Hi Omer, Icy batch mode works with Protocol and currently there is no real solution to process big 3D
unread,
Icy
batch
spim
Q&A
icy features
Hi Omer, Icy batch mode works with Protocol and currently there is no real solution to process big 3D
3/23/16
r.g.r...@gmail.com
,
Stephane
3
1/28/16
Q&A
ROI statistics plugin: Surface area and Volume calculations
Thanks Stephane, it really helped seeing it written out like that, thanks for taking the time! Best,
unread,
ROI
batch
statistics
surface
volume
Q&A
ROI statistics plugin: Surface area and Volume calculations
Thanks Stephane, it really helped seeing it written out like that, thanks for taking the time! Best,
1/28/16
Jake Howden
, …
Alexandre Dufour
12
3/4/15
Q&A
How to export multiple ROI statistics to excel
Ah I had just forgotten to link the add ROI to sequence to ROI statistics. That's fixed the
unread,
ROI
batch
export
feature-request
protocols
Q&A
How to export multiple ROI statistics to excel
Ah I had just forgotten to link the add ROI to sequence to ROI statistics. That's fixed the
3/4/15
IcyLyd
,
Alexandre Dufour
3
9/16/14
Q&A
bug with substract or merge ROI-initialization of ROI
Thank you so much, it works now. And my big SIM Colocalisation protocole is running wonderfully ! :)
unread,
ROI
batch
bug-report
folder
loop
Q&A
bug with substract or merge ROI-initialization of ROI
Thank you so much, it works now. And my big SIM Colocalisation protocole is running wonderfully ! :)
9/16/14
Noémie Jelly
,
Julien
2
12/18/13
Q&A
Request - Batch in spot detector
Hello Noemie, I hope the attached script will help. Please, note that the script will linearly change
unread,
batch
detection
feature-request
spot-detector
Q&A
Request - Batch in spot detector
Hello Noemie, I hope the attached script will help. Please, note that the script will linearly change
12/18/13
MLB
11/19/13
Q&A
Protocol to merge different time and different channel.
Hi, I would like to create a protocol to merge different time and different channel. have images like
unread,
batch
protocols
Q&A
Protocol to merge different time and different channel.
Hi, I would like to create a protocol to merge different time and different channel. have images like
11/19/13
IcyLyd
6/9/13
Q&A
Protocols: export info in xls file and xls sheets
Hi, First question: I use the colocalizer protocole which diplays the % of colocalization in a "
unread,
batch
feature-request
protocols
Q&A
Protocols: export info in xls file and xls sheets
Hi, First question: I use the colocalizer protocole which diplays the % of colocalization in a "
6/9/13
Anke
, …
Thomas Provoost
4
6/4/13
Q&A
Question about "Batch spot detection with custom output" protocol
Hi, I updated the Script Editor so this should work now. Please keep me updated. Cheers, Thomas 2013/
unread,
batch
protocols
Q&A
Question about "Batch spot detection with custom output" protocol
Hi, I updated the Script Editor so this should work now. Please keep me updated. Cheers, Thomas 2013/
6/4/13
Arthur Bellier
,
Alexandre Dufour
7
5/31/13
Q&A
Protocol editor: ROI & folder loop
sorry, display has to come from "element" of block 4, I have updated the protocol On Friday
unread,
ROI
batch
protocols
Q&A
Protocol editor: ROI & folder loop
sorry, display has to come from "element" of block 4, I have updated the protocol On Friday
5/31/13
pierre
,
Stephane
4
8/10/12
Q&A
How to batch process particle tracking ?
Hi Pierre, Ok, if you need some assistance, free feel to ask there :) Cheers, - Stephane Le jeudi 9
unread,
batch
protocols
track-manager
Q&A
How to batch process particle tracking ?
Hi Pierre, Ok, if you need some assistance, free feel to ask there :) Cheers, - Stephane Le jeudi 9
8/10/12
Alexandre Dufour
7/10/12
Announcement
Introducing Protocols for Icy
We are proud to announce the release of 'Protocols', our visual programming environment for
unread,
batch
protocols
Announcement
Introducing Protocols for Icy
We are proud to announce the release of 'Protocols', our visual programming environment for
7/10/12
go²
,
Fab
2
6/28/12
Q&A
suggestions
Hi, thank you for the feedback, I can add a lot of features to the XML file but I am facing some
unread,
batch
feature-request
Q&A
suggestions
Hi, thank you for the feedback, I can add a lot of features to the XML file but I am facing some
6/28/12