I have just set up a fresh ICAT 4.4 with one authenticator. I am _not_ using Lucence which is an optional plugin isn't it?
Therefore I commented out the Lucence specific lines in the icat.properties file.
# We assume that c is an authenticated pyICAT.ICatClient instance (which is derived from suds.client.Client):
[2015-02-09T16:52:10.357+0100] [glassfish 4.0] [WARNING] [ejb.system_exception] [javax.enterprise.system.container.ejb.com.sun.ejb.containers] [tid: _ThreadID=40 _ThreadName=jk-connector(3)] [timeMillis: 1423497130357] [levelValue: 900] [[
EJB5184:A system exception occurred during an invocation on EJB LuceneSingleton, method: public void org.icatproject.core.manager.LuceneSingleton.addDocument(org.icatproject.core.entity.EntityBaseBean) throws org.icatproject.core.IcatException]]
[2015-02-09T16:52:10.358+0100] [glassfish 4.0] [WARNING] [] [javax.enterprise.system.container.ejb.com.sun.ejb.containers] [tid: _ThreadID=40 _ThreadName=jk-connector(3)] [timeMillis: 1423497130358] [levelValue: 900] [[
javax.ejb.EJBException
at com.sun.ejb.containers.EJBContainerTransactionManager.processSystemException(EJBContainerTransactionManager.java:748)
at com.sun.ejb.containers.EJBContainerTransactionManager.completeNewTx(EJBContainerTransactionManager.java:698)
at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:503)
at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4475)
at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2009)
at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:1979)
at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220)
at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88)
at com.sun.proxy.$Proxy249.addDocument(Unknown Source)
at org.icatproject.core.manager.__EJB31_Generated__LuceneSingleton__Intf____Bean__.addDocument(Unknown Source)
at org.icatproject.core.entity.EntityBaseBean.addToLucene(EntityBaseBean.java:82)
at org.icatproject.core.manager.EntityBeanManager.create(EntityBeanManager.java:199)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081)
at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153)
at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4695)
at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:630)
at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822)
at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:582)
at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163)
at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140)
at sun.reflect.GeneratedMethodAccessor67.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883)
at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822)
at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369)
at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4667)
at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4655)
at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212)
at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88)
at com.sun.proxy.$Proxy260.create(Unknown Source)
at org.icatproject.core.manager.__EJB31_Generated__EntityBeanManager__Intf____Bean__.create(Unknown Source)
at org.icatproject.exposed.ICAT.create(ICAT.java:126)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081)
at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153)
at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4695)
at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:630)
at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822)
at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:582)
at org.icatproject.exposed.ICAT.logMethods(ICAT.java:317)
at sun.reflect.GeneratedMethodAccessor75.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at com.sun.ejb.containers.interceptors.BeanAroundInvokeInterceptor.intercept(InterceptorManager.java:924)
at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822)
at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:582)
at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163)
at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140)
at sun.reflect.GeneratedMethodAccessor67.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883)
at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822)
at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369)
at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4667)
at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4655)
at com.sun.ejb.containers.WebServiceInvocationHandler.invoke(WebServiceInvocationHandler.java:193)
at com.sun.proxy.$Proxy261.create(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.glassfish.webservices.InvokerImpl.invoke(InvokerImpl.java:82)
at org.glassfish.webservices.EjbInvokerImpl.invoke(EjbInvokerImpl.java:82)
at com.sun.xml.ws.server.InvokerTube$2.invoke(InvokerTube.java:149)
at com.sun.xml.ws.server.sei.SEIInvokerTube.processRequest(SEIInvokerTube.java:88)
at com.sun.xml.ws.api.pipe.Fiber.__doRun(Fiber.java:1136)
at com.sun.xml.ws.api.pipe.Fiber._doRun(Fiber.java:1050)
at com.sun.xml.ws.api.pipe.Fiber.doRun(Fiber.java:1019)
at com.sun.xml.ws.api.pipe.Fiber.runSync(Fiber.java:877)
at com.sun.xml.ws.api.pipe.helper.AbstractTubeImpl.process(AbstractTubeImpl.java:136)
at org.glassfish.webservices.MonitoringPipe.process(MonitoringPipe.java:142)
at com.sun.xml.ws.api.pipe.helper.PipeAdapter.processRequest(PipeAdapter.java:119)
at com.sun.xml.ws.api.pipe.Fiber.__doRun(Fiber.java:1136)
at com.sun.xml.ws.api.pipe.Fiber._doRun(Fiber.java:1050)
at com.sun.xml.ws.api.pipe.Fiber.doRun(Fiber.java:1019)
at com.sun.xml.ws.api.pipe.Fiber.runSync(Fiber.java:877)
at com.sun.xml.ws.api.pipe.helper.AbstractTubeImpl.process(AbstractTubeImpl.java:136)
at com.sun.enterprise.security.webservices.CommonServerSecurityPipe.processRequest(CommonServerSecurityPipe.java:210)
at com.sun.enterprise.security.webservices.CommonServerSecurityPipe.process(CommonServerSecurityPipe.java:142)
at com.sun.xml.ws.api.pipe.helper.PipeAdapter.processRequest(PipeAdapter.java:119)
at com.sun.xml.ws.api.pipe.Fiber.__doRun(Fiber.java:1136)
at com.sun.xml.ws.api.pipe.Fiber._doRun(Fiber.java:1050)
at com.sun.xml.ws.api.pipe.Fiber.doRun(Fiber.java:1019)
at com.sun.xml.ws.api.pipe.Fiber.runSync(Fiber.java:877)
at com.sun.xml.ws.server.WSEndpointImpl$2.process(WSEndpointImpl.java:420)
at com.sun.xml.ws.transport.http.HttpAdapter$HttpToolkit.handle(HttpAdapter.java:687)
at com.sun.xml.ws.transport.http.HttpAdapter.handle(HttpAdapter.java:266)
at com.sun.xml.ws.transport.http.servlet.ServletAdapter.handle(ServletAdapter.java:169)
at org.glassfish.webservices.Ejb3MessageDispatcher.handlePost(Ejb3MessageDispatcher.java:110)
at org.glassfish.webservices.Ejb3MessageDispatcher.invoke(Ejb3MessageDispatcher.java:80)
at org.glassfish.webservices.EjbWebServiceServlet.dispatchToEjbEndpoint(EjbWebServiceServlet.java:203)
at org.glassfish.webservices.EjbWebServiceServlet.service(EjbWebServiceServlet.java:146)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
at org.glassfish.grizzly.servlet.ServletHandler.doServletService(ServletHandler.java:242)
at org.glassfish.grizzly.servlet.ServletHandler.service(ServletHandler.java:193)
at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:246)
at org.glassfish.grizzly.http.server.HttpHandler.runService(HttpHandler.java:191)
at org.glassfish.grizzly.http.server.HttpHandler.doHandle(HttpHandler.java:168)
at org.glassfish.grizzly.http.server.HttpServerFilter.handleRead(HttpServerFilter.java:189)
at org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:119)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:288)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:206)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:136)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:114)
at org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:77)
at org.glassfish.grizzly.nio.transport.TCPNIOTransport.fireIOEvent(TCPNIOTransport.java:838)
at org.glassfish.grizzly.strategies.AbstractIOStrategy.fireIOEvent(AbstractIOStrategy.java:113)
at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.run0(WorkerThreadIOStrategy.java:115)
at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.access$100(WorkerThreadIOStrategy.java:55)
at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy$WorkerThreadRunnable.run(WorkerThreadIOStrategy.java:135)
at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:564)
at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.run(AbstractThreadPool.java:544)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.NullPointerException
at org.icatproject.core.manager.LuceneSingleton.buildDoc(LuceneSingleton.java:196)
at org.icatproject.core.manager.LuceneSingleton.addDocument(LuceneSingleton.java:187)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081)
at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153)
at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4695)
at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:630)
at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822)
at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:582)
at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163)
at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140)
at sun.reflect.GeneratedMethodAccessor67.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883)
at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822)
at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369)
at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4667)
at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4655)
at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212)
... 115 more
]]
I appreciate any help.