I don't believe the xDoclet technique can be used to set bean-specific transaction timeout. To set this extension value, you need to use RAD or the AST tooling as described in the InfoCenter at http://publib.boulder.ibm.com/infocenter/wasinfo/v6r1/index.jsp?topic=/com.ibm.etools.j2ee.ui.ws.ext.doc/topics/tedglobtx.html .
HTH.