[information-artifact-ontology] r702 committed - fix incorrect referenced IAO terms

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Jul 10, 2014, 11:49:29 AM7/10/14
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Revision: 702
Author: zheng...@gmail.com
Date: Thu Jul 10 15:49:17 2014 UTC
Log: fix incorrect referenced IAO terms
http://code.google.com/p/information-artifact-ontology/source/detail?r=702

Modified:
/branches/2014-06-13/ontology/obsolete.owl

=======================================
--- /branches/2014-06-13/ontology/obsolete.owl Mon Jun 30 21:31:34 2014 UTC
+++ /branches/2014-06-13/ontology/obsolete.owl Thu Jul 10 15:49:17 2014 UTC
@@ -87,61 +87,6 @@
<owl:AnnotationProperty
rdf:about="http://purl.obolibrary.org/obo/IAO_0000231"/>


-
- <!-- http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000111
-->
-
- <owl:AnnotationProperty
rdf:about="http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000111"/>
-
-
-
- <!-- http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000112
-->
-
- <owl:AnnotationProperty
rdf:about="http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000112"/>
-
-
-
- <!-- http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000114
-->
-
- <owl:AnnotationProperty
rdf:about="http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000114"/>
-
-
-
- <!-- http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000115
-->
-
- <owl:AnnotationProperty
rdf:about="http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000115"/>
-
-
-
- <!-- http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000116
-->
-
- <owl:AnnotationProperty
rdf:about="http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000116"/>
-
-
-
- <!-- http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000117
-->
-
- <owl:AnnotationProperty
rdf:about="http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000117"/>
-
-
-
- <!-- http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000118
-->
-
- <owl:AnnotationProperty
rdf:about="http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000118"/>
-
-
-
- <!-- http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000119
-->
-
- <owl:AnnotationProperty
rdf:about="http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000119"/>
-
-
-
- <!-- http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000231
-->
-
- <owl:AnnotationProperty
rdf:about="http://purl.obolibrary.org/obo/iao/dev/obsolete.owl#IAO_0000231"/>
-
-
-
<!--

///////////////////////////////////////////////////////////////////////////////////////
//
@@ -157,17 +102,17 @@

<owl:ObjectProperty
rdf:about="http://purl.obolibrary.org/obo/IAO_0000135">
<rdfs:label
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete_specifically
denotes</rdfs:label>
- <IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">8/6/2009 Alan
Ruttenberg: The suggestions is to deprecate specific and generically
denotes in favor of a single denote relationship that corresponds to the
generic sense</IAO_0000116>
- <IAO_0000117
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Alan
Ruttenberg</IAO_0000117>
- <IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Smith, Ceusters,
Ruttenberg, 2000 years of philosophy</IAO_0000119>
- <IAO_0000112
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The process of
creation is, for example, writing down on paper the name of a friend by
deliberately creating a certain pattern using ink.
+ <obo:IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">8/6/2009 Alan
Ruttenberg: The suggestions is to deprecate specific and generically
denotes in favor of a single denote relationship that corresponds to the
generic sense</obo:IAO_0000116>
+ <obo:IAO_0000117
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Alan
Ruttenberg</obo:IAO_0000117>
+ <obo:IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Smith, Ceusters,
Ruttenberg, 2000 years of philosophy</obo:IAO_0000119>
+ <obo:IAO_0000112
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The process of
creation is, for example, writing down on paper the name of a friend by
deliberately creating a certain pattern using ink.

Here the ink + paper is the independent continuant and the carrier is the
pattern in the ink.

c = pattern in the ink
b = paper + ink
-r = friend</IAO_0000112>
- <IAO_0000115
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">c specifically
denotes r =def
+r = friend</obo:IAO_0000112>
+ <obo:IAO_0000115
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">c specifically
denotes r =def
r is a portion of reality
&amp; c is a particular quality
&amp; c depends specifically on some independent continuant b
@@ -182,11 +127,11 @@
Pattern of ink arrayed on paper as mark when writing down a friend&apos;s
name

Case 3
-Pattern of magnetic domains on scattered pieces of a hard disk platter as
mark when saving a file.</IAO_0000115>
- <IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">see
http://code.google.com/p/information-artifact-ontology/issues/detail?id=25&amp;q=denote</IAO_0000116>
+Pattern of magnetic domains on scattered pieces of a hard disk platter as
mark when saving a file.</obo:IAO_0000115>
+ <obo:IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">see
http://code.google.com/p/information-artifact-ontology/issues/detail?id=25&amp;q=denote</obo:IAO_0000116>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
- <IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<rdfs:subPropertyOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteProperty"/>
</owl:ObjectProperty>

@@ -196,9 +141,9 @@

<owl:ObjectProperty
rdf:about="http://purl.obolibrary.org/obo/IAO_0000220">
<rdfs:label
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete_materially
denotes</rdfs:label>
- <IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">see
http://code.google.com/p/information-artifact-ontology/issues/detail?id=25&amp;q=denote</IAO_0000116>
+ <obo:IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">see
http://code.google.com/p/information-artifact-ontology/issues/detail?id=25&amp;q=denote</obo:IAO_0000116>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
<rdfs:subPropertyOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteProperty"/>
</owl:ObjectProperty>

@@ -209,7 +154,7 @@
<owl:ObjectProperty
rdf:about="http://purl.obolibrary.org/obo/IAO_0000222">
<rdfs:label
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete_describes</rdfs:label>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
<rdfs:subPropertyOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteProperty"/>
</owl:ObjectProperty>

@@ -220,7 +165,7 @@
<owl:ObjectProperty
rdf:about="http://purl.obolibrary.org/obo/IAO_0000223">
<rdfs:label
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete_represents</rdfs:label>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
<rdfs:subPropertyOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteProperty"/>
</owl:ObjectProperty>

@@ -249,7 +194,7 @@
<rdfs:label
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete_artifact</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
</owl:Class>


@@ -259,16 +204,16 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000012">
<rdfs:label xml:lang="en">obsolete2_digital entity</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
- <IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000261</IAO_0000119>
+ <obo:IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000261</obo:IAO_0000119>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000116 xml:lang="en">3/22/2009 Alan Ruttenberg, obsoleted
per
http://groups.google.com/group/information-ontology/browse_thread/thread/789ad4b7708d5cf4
+ <obo:IAO_0000116 xml:lang="en">3/22/2009 Alan Ruttenberg,
obsoleted per
http://groups.google.com/group/information-ontology/browse_thread/thread/789ad4b7708d5cf4

-Superclass was &apos;digitial quality&apos;</IAO_0000116>
- <IAO_0000115 xml:lang="en">A digital entity is an information
entity which is a collection of bits that can be interpreted by a computer.
Two digital entities are the same if they are bitwise
identical.</IAO_0000115>
- <IAO_0000119 xml:lang="en">group:OBI</IAO_0000119>
- <IAO_0000111 xml:lang="en">obsolete_digital entity</IAO_0000111>
- <IAO_0000117 xml:lang="en">person:Chris Stoeckert</IAO_0000117>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+Superclass was &apos;digitial quality&apos;</obo:IAO_0000116>
+ <obo:IAO_0000115 xml:lang="en">A digital entity is an information
entity which is a collection of bits that can be interpreted by a computer.
Two digital entities are the same if they are bitwise
identical.</obo:IAO_0000115>
+ <obo:IAO_0000119 xml:lang="en">group:OBI</obo:IAO_0000119>
+ <obo:IAO_0000111 xml:lang="en">obsolete_digital
entity</obo:IAO_0000111>
+ <obo:IAO_0000117 xml:lang="en">person:Chris
Stoeckert</obo:IAO_0000117>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
</owl:Class>


@@ -279,7 +224,7 @@
<rdfs:label
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete_material_entity</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000226"/>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000226"/>
</owl:Class>


@@ -289,17 +234,17 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000019">
<rdfs:label xml:lang="en">obsolete2_binary digital
entity</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
- <IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000244</IAO_0000119>
+ <obo:IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000244</obo:IAO_0000119>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000116 xml:lang="en">3/22/2009 Alan Ruttenberg, obsoleted
per
http://groups.google.com/group/information-ontology/browse_thread/thread/789ad4b7708d5cf4
-Superclass was &apos;digital entity&apos;</IAO_0000116>
- <IAO_0000115 xml:lang="en">A binary digital entity is a digital
entity that is encoded in a way that is not easily human readable and that
contains other than text characters.</IAO_0000115>
- <IAO_0000112 xml:lang="en">MS Word document, ZIP file, DICOM file,
JPEG file</IAO_0000112>
- <IAO_0000111 xml:lang="en">binary digital entity</IAO_0000111>
- <IAO_0000116 xml:lang="en">digital_entity</IAO_0000116>
- <IAO_0000119 xml:lang="en">group:OBI</IAO_0000119>
- <IAO_0000117 xml:lang="en">person:Chris Stoeckert</IAO_0000117>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000116 xml:lang="en">3/22/2009 Alan Ruttenberg,
obsoleted per
http://groups.google.com/group/information-ontology/browse_thread/thread/789ad4b7708d5cf4
+Superclass was &apos;digital entity&apos;</obo:IAO_0000116>
+ <obo:IAO_0000115 xml:lang="en">A binary digital entity is a
digital entity that is encoded in a way that is not easily human readable
and that contains other than text characters.</obo:IAO_0000115>
+ <obo:IAO_0000112 xml:lang="en">MS Word document, ZIP file, DICOM
file, JPEG file</obo:IAO_0000112>
+ <obo:IAO_0000111 xml:lang="en">binary digital
entity</obo:IAO_0000111>
+ <obo:IAO_0000116 xml:lang="en">digital_entity</obo:IAO_0000116>
+ <obo:IAO_0000119 xml:lang="en">group:OBI</obo:IAO_0000119>
+ <obo:IAO_0000117 xml:lang="en">person:Chris
Stoeckert</obo:IAO_0000117>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
</owl:Class>


@@ -309,12 +254,12 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000024">
<rdfs:label
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete_unit of
measure</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
- <IAO_0000117
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Alan
Ruttenberg</IAO_0000117>
- <IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Smith, Ceusters,
Ruttenberg, 2000 years of philosophy</IAO_0000119>
- <IAO_0000112
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The length of a
ruler.</IAO_0000112>
- <IAO_0000115
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">a unit of measure is
the quality of some material entity compared to which another quality is
some multiple of.</IAO_0000115>
+ <obo:IAO_0000117
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Alan
Ruttenberg</obo:IAO_0000117>
+ <obo:IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Smith, Ceusters,
Ruttenberg, 2000 years of philosophy</obo:IAO_0000119>
+ <obo:IAO_0000112
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The length of a
ruler.</obo:IAO_0000112>
+ <obo:IAO_0000115
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">a unit of measure is
the quality of some material entity compared to which another quality is
some multiple of.</obo:IAO_0000115>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
</owl:Class>


@@ -324,20 +269,20 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000035">
<rdfs:label xml:lang="en">obsolete_study
interpretation</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
- <IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-03-16:
definition was &quot;A conclusion is a narrative object which can be
published in a paper summerizing and interpreting a protocol
application.&quot;</IAO_0000116>
- <IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-03-16: work has
been done on this term during during the OBI workshop winter 2009 and the
current definition was considered acceptable for use in OBI. If there is a
need to modify this definition please notify OBI.</IAO_0000116>
- <IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000005</IAO_0000119>
- <IAO_0000117
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PERSON: Alan
Ruttenberg</IAO_0000117>
- <IAO_0000117
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PERSON: Melanie
Courtot</IAO_0000117>
- <IAO_0000118
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">conclusion</IAO_0000118>
+ <obo:IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-03-16:
definition was &quot;A conclusion is a narrative object which can be
published in a paper summerizing and interpreting a protocol
application.&quot;</obo:IAO_0000116>
+ <obo:IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-03-16: work has
been done on this term during during the OBI workshop winter 2009 and the
current definition was considered acceptable for use in OBI. If there is a
need to modify this definition please notify OBI.</obo:IAO_0000116>
+ <obo:IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000005</obo:IAO_0000119>
+ <obo:IAO_0000117
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PERSON: Alan
Ruttenberg</obo:IAO_0000117>
+ <obo:IAO_0000117
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PERSON: Melanie
Courtot</obo:IAO_0000117>
+ <obo:IAO_0000118
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">conclusion</obo:IAO_0000118>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000115 xml:lang="en">A study interpretation is a textual
entity about the implications of a study result. Examples include
discussion of whether a hypothesis is false, whether the study failed to
address the hypothesis, and whether the study results have led to new
hypotheses</IAO_0000115>
- <IAO_0000117 xml:lang="en">Lawrence Hunter</IAO_0000117>
- <IAO_0000117 xml:lang="en">PERSON: Jennifer Fostel</IAO_0000117>
- <IAO_0000116 xml:lang="en">The obsoleting of narrative object
required a modest change in the definition of this term. Circularity with
&quot;interpretation... interprets&quot; has been removed, using
&quot;about the implications&quot; instead.</IAO_0000116>
- <IAO_0000111 xml:lang="en">obsolete_study
interpretation</IAO_0000111>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
- <IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
+ <obo:IAO_0000115 xml:lang="en">A study interpretation is a textual
entity about the implications of a study result. Examples include
discussion of whether a hypothesis is false, whether the study failed to
address the hypothesis, and whether the study results have led to new
hypotheses</obo:IAO_0000115>
+ <obo:IAO_0000117 xml:lang="en">Lawrence Hunter</obo:IAO_0000117>
+ <obo:IAO_0000117 xml:lang="en">PERSON: Jennifer
Fostel</obo:IAO_0000117>
+ <obo:IAO_0000116 xml:lang="en">The obsoleting of narrative object
required a modest change in the definition of this term. Circularity with
&quot;interpretation... interprets&quot; has been removed, using
&quot;about the implications&quot; instead.</obo:IAO_0000116>
+ <obo:IAO_0000111 xml:lang="en">obsolete_study
interpretation</obo:IAO_0000111>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
</owl:Class>


@@ -347,17 +292,17 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000047">
<rdfs:label xml:lang="en">obsolete2_text based digital
entity</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
- <IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000132</IAO_0000119>
- <IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">group:OBI</IAO_0000119>
+ <obo:IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000132</obo:IAO_0000119>
+ <obo:IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">group:OBI</obo:IAO_0000119>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000116 xml:lang="en">3/22/2009 Alan Ruttenberg, obsoleted
per
http://groups.google.com/group/information-ontology/browse_thread/thread/789ad4b7708d5cf4
-superclass was &apos;digital document&apos;</IAO_0000116>
- <IAO_0000115 xml:lang="en">A text based digital entity is a
digital entity that is encoded so that it only contains text
characters.</IAO_0000115>
- <IAO_0000112 xml:lang="en">XML file, C++ source code
file</IAO_0000112>
- <IAO_0000116 xml:lang="en">digital_entity</IAO_0000116>
- <IAO_0000117 xml:lang="en">person:Chris Stoeckert</IAO_0000117>
- <IAO_0000111 xml:lang="en">text based digital entity</IAO_0000111>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000116 xml:lang="en">3/22/2009 Alan Ruttenberg,
obsoleted per
http://groups.google.com/group/information-ontology/browse_thread/thread/789ad4b7708d5cf4
+superclass was &apos;digital document&apos;</obo:IAO_0000116>
+ <obo:IAO_0000115 xml:lang="en">A text based digital entity is a
digital entity that is encoded so that it only contains text
characters.</obo:IAO_0000115>
+ <obo:IAO_0000112 xml:lang="en">XML file, C++ source code
file</obo:IAO_0000112>
+ <obo:IAO_0000116 xml:lang="en">digital_entity</obo:IAO_0000116>
+ <obo:IAO_0000117 xml:lang="en">person:Chris
Stoeckert</obo:IAO_0000117>
+ <obo:IAO_0000111 xml:lang="en">text based digital
entity</obo:IAO_0000111>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
</owl:Class>


@@ -367,17 +312,17 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000059">
<rdfs:label xml:lang="en">obsolete2_report figure</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
- <IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000027</IAO_0000119>
+ <obo:IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000027</obo:IAO_0000119>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000115 xml:lang="en">A report figure is a report display
element that has some aspect of illustration, but may be a composite of
figures, images, and other elements</IAO_0000115>
- <IAO_0000116 xml:lang="en">I prepended the &apos;report &apos; to
make it clear that we mean parts of reports here. We may want a more
generic version of &apos;figure&apos;, in which case this would become a
defined class - figure and part_of some report</IAO_0000116>
- <IAO_0000116 xml:lang="en">Replaced by defined version of
figure</IAO_0000116>
- <IAO_0000119 xml:lang="en">group:OBI</IAO_0000119>
- <IAO_0000117 xml:lang="en">person:Alan Ruttenberg</IAO_0000117>
- <IAO_0000117 xml:lang="en">person:Allyson Lister</IAO_0000117>
- <IAO_0000111 xml:lang="en">report figure</IAO_0000111>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
- <IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000124"/>
+ <obo:IAO_0000115 xml:lang="en">A report figure is a report display
element that has some aspect of illustration, but may be a composite of
figures, images, and other elements</obo:IAO_0000115>
+ <obo:IAO_0000116 xml:lang="en">I prepended the &apos;report &apos;
to make it clear that we mean parts of reports here. We may want a more
generic version of &apos;figure&apos;, in which case this would become a
defined class - figure and part_of some report</obo:IAO_0000116>
+ <obo:IAO_0000116 xml:lang="en">Replaced by defined version of
figure</obo:IAO_0000116>
+ <obo:IAO_0000119 xml:lang="en">group:OBI</obo:IAO_0000119>
+ <obo:IAO_0000117 xml:lang="en">person:Alan
Ruttenberg</obo:IAO_0000117>
+ <obo:IAO_0000117 xml:lang="en">person:Allyson
Lister</obo:IAO_0000117>
+ <obo:IAO_0000111 xml:lang="en">report figure</obo:IAO_0000111>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000124"/>
</owl:Class>


@@ -387,22 +332,22 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000091">
<rdfs:label xml:lang="en">obsolete_report element</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
- <IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-03-16: needs
some more work (clarify relations).</IAO_0000116>
- <IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-03-16: was
report display element with definition: A report display element is a
narrative object that is part of a report. Report display elements are set
off from the textual parts of a report and are typically given a label(e.g.
Figure 2) which is used to refer to the element from the text. Typically
the 2d layout is part of the identity of such elements.</IAO_0000116>
- <IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-03-16: work has
been done on this term during during the OBI workshop winter 2009 and the
current definition was considered acceptable for use in OBI. If there is a
need to modify this definition please notify OBI.</IAO_0000116>
- <IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-08-10 Alan
Ruttenberg: Larry Hunter suggests that this be obsoleted and replaced by
&apos;textual entity&apos; and &apos;figure&apos;. Alan restored as there
are OBI dependencies and this merits further discussion</IAO_0000116>
- <IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000001</IAO_0000119>
- <IAO_0000117
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PERSON: Melanie
Courtot</IAO_0000117>
- <IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Replaced by textual
entity and figure</IAO_0000116>
+ <obo:IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-03-16: needs
some more work (clarify relations).</obo:IAO_0000116>
+ <obo:IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-03-16: was
report display element with definition: A report display element is a
narrative object that is part of a report. Report display elements are set
off from the textual parts of a report and are typically given a label(e.g.
Figure 2) which is used to refer to the element from the text. Typically
the 2d layout is part of the identity of such elements.</obo:IAO_0000116>
+ <obo:IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-03-16: work has
been done on this term during during the OBI workshop winter 2009 and the
current definition was considered acceptable for use in OBI. If there is a
need to modify this definition please notify OBI.</obo:IAO_0000116>
+ <obo:IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-08-10 Alan
Ruttenberg: Larry Hunter suggests that this be obsoleted and replaced by
&apos;textual entity&apos; and &apos;figure&apos;. Alan restored as there
are OBI dependencies and this merits further discussion</obo:IAO_0000116>
+ <obo:IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000001</obo:IAO_0000119>
+ <obo:IAO_0000117
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PERSON: Melanie
Courtot</obo:IAO_0000117>
+ <obo:IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Replaced by textual
entity and figure</obo:IAO_0000116>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000115 xml:lang="en">A report element is a narrative object
in which information is presented and consumed by a human being, and is
part of a report. Examples of report elements are figure (dot plot), table,
text portion (may include a movie or audio clip on a web
page).</IAO_0000115>
- <IAO_0000119 xml:lang="en">GROUP:OBI</IAO_0000119>
- <IAO_0000117 xml:lang="en">PERSON: Alan Ruttenberg</IAO_0000117>
- <IAO_0000117 xml:lang="en">PERSON: Allyson Lister</IAO_0000117>
- <IAO_0000116 xml:lang="en">There will be some issue here about
whether these are defined classes. As intended these are meant to denote
the parts of the report that are not textual but are typically boxed and
set within the text, labelled with some identifier, and referred to in the
text</IAO_0000116>
- <IAO_0000111 xml:lang="en">report element</IAO_0000111>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
- <IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000120"/>
+ <obo:IAO_0000115 xml:lang="en">A report element is a narrative
object in which information is presented and consumed by a human being, and
is part of a report. Examples of report elements are figure (dot plot),
table, text portion (may include a movie or audio clip on a web
page).</obo:IAO_0000115>
+ <obo:IAO_0000119 xml:lang="en">GROUP:OBI</obo:IAO_0000119>
+ <obo:IAO_0000117 xml:lang="en">PERSON: Alan
Ruttenberg</obo:IAO_0000117>
+ <obo:IAO_0000117 xml:lang="en">PERSON: Allyson
Lister</obo:IAO_0000117>
+ <obo:IAO_0000116 xml:lang="en">There will be some issue here about
whether these are defined classes. As intended these are meant to denote
the parts of the report that are not textual but are typically boxed and
set within the text, labelled with some identifier, and referred to in the
text</obo:IAO_0000116>
+ <obo:IAO_0000111 xml:lang="en">report element</obo:IAO_0000111>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000120"/>
</owl:Class>


@@ -412,15 +357,15 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000093">
<rdfs:label xml:lang="en">obsolete2_binary executable</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
- <IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000222</IAO_0000119>
+ <obo:IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000222</obo:IAO_0000119>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000116 xml:lang="en">3/22/2009 Alan Ruttenberg, obsoleted
per
http://groups.google.com/group/information-ontology/browse_thread/thread/789ad4b7708d5cf4
-superclass was &apos;digital entity&apos;</IAO_0000116>
- <IAO_0000115 xml:lang="en">Binary executable is a digital entity
consisting of the binary representation of machine instructions of a
specific processor or they may be binary pseudocode for a virtual machine.
A non-source executable file is also called an object program. It is
assumed that the binary executable file contains properly-formatted
computer instructions. (derived from Wikipedia, Nov 1, 2007)</IAO_0000115>
- <IAO_0000111 xml:lang="en">binary executable</IAO_0000111>
- <IAO_0000119 xml:lang="en">group:OBI</IAO_0000119>
- <IAO_0000117 xml:lang="en">person:Jennifer Fostel</IAO_0000117>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000116 xml:lang="en">3/22/2009 Alan Ruttenberg,
obsoleted per
http://groups.google.com/group/information-ontology/browse_thread/thread/789ad4b7708d5cf4
+superclass was &apos;digital entity&apos;</obo:IAO_0000116>
+ <obo:IAO_0000115 xml:lang="en">Binary executable is a digital
entity consisting of the binary representation of machine instructions of a
specific processor or they may be binary pseudocode for a virtual machine.
A non-source executable file is also called an object program. It is
assumed that the binary executable file contains properly-formatted
computer instructions. (derived from Wikipedia, Nov 1,
2007)</obo:IAO_0000115>
+ <obo:IAO_0000111 xml:lang="en">binary executable</obo:IAO_0000111>
+ <obo:IAO_0000119 xml:lang="en">group:OBI</obo:IAO_0000119>
+ <obo:IAO_0000117 xml:lang="en">person:Jennifer
Fostel</obo:IAO_0000117>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
</owl:Class>


@@ -430,16 +375,16 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000097">
<rdfs:label xml:lang="en">obsolete_report table</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
- <IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-08-10 Alan
Ruttenberg: Larry Hunter suggests that this be obsoleted and replaced by
&apos;textual entity table&apos;. Alan restored as there are OBI
dependencies and this merits further discussion</IAO_0000116>
- <IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000265</IAO_0000119>
+ <obo:IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2009-08-10 Alan
Ruttenberg: Larry Hunter suggests that this be obsoleted and replaced by
&apos;textual entity table&apos;. Alan restored as there are OBI
dependencies and this merits further discussion</obo:IAO_0000116>
+ <obo:IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000265</obo:IAO_0000119>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000115 xml:lang="en">A report table is a report display
element consisting of a matrix of cells layed out in a grid, some set of
which are filled with some information content</IAO_0000115>
- <IAO_0000119 xml:lang="en">group:OBI</IAO_0000119>
- <IAO_0000117 xml:lang="en">person:Alan Ruttenberg</IAO_0000117>
- <IAO_0000117 xml:lang="en">person:Allyson Lister</IAO_0000117>
- <IAO_0000111 xml:lang="en">report table</IAO_0000111>
- <IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000002"/>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000115 xml:lang="en">A report table is a report display
element consisting of a matrix of cells layed out in a grid, some set of
which are filled with some information content</obo:IAO_0000115>
+ <obo:IAO_0000119 xml:lang="en">group:OBI</obo:IAO_0000119>
+ <obo:IAO_0000117 xml:lang="en">person:Alan
Ruttenberg</obo:IAO_0000117>
+ <obo:IAO_0000117 xml:lang="en">person:Allyson
Lister</obo:IAO_0000117>
+ <obo:IAO_0000111 xml:lang="en">report table</obo:IAO_0000111>
+ <obo:IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000002"/>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
</owl:Class>


@@ -449,15 +394,15 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000105">
<rdfs:label xml:lang="en">obsolete2_digital document</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
- <IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000195</IAO_0000119>
+ <obo:IAO_0000119
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBI_0000195</obo:IAO_0000119>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000116 xml:lang="en">3/22/2009 Alan Ruttenberg, obsoleted
per
http://groups.google.com/group/information-ontology/browse_thread/thread/789ad4b7708d5cf4
-superclass was &apos;digial entity&apos;</IAO_0000116>
- <IAO_0000115 xml:lang="en">A digital document is a digital entity
consisting of an electronic file which can be rendered into human-readable
form by one or more computational applications. The digital document does
not refer to the information content of the document but to an instance of
the file.</IAO_0000115>
- <IAO_0000111 xml:lang="en">digital document</IAO_0000111>
- <IAO_0000119 xml:lang="en">group:OBI</IAO_0000119>
- <IAO_0000117 xml:lang="en">person:Jennifer Fostel</IAO_0000117>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000116 xml:lang="en">3/22/2009 Alan Ruttenberg,
obsoleted per
http://groups.google.com/group/information-ontology/browse_thread/thread/789ad4b7708d5cf4
+superclass was &apos;digial entity&apos;</obo:IAO_0000116>
+ <obo:IAO_0000115 xml:lang="en">A digital document is a digital
entity consisting of an electronic file which can be rendered into
human-readable form by one or more computational applications. The digital
document does not refer to the information content of the document but to
an instance of the file.</obo:IAO_0000115>
+ <obo:IAO_0000111 xml:lang="en">digital document</obo:IAO_0000111>
+ <obo:IAO_0000119 xml:lang="en">group:OBI</obo:IAO_0000119>
+ <obo:IAO_0000117 xml:lang="en">person:Jennifer
Fostel</obo:IAO_0000117>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
</owl:Class>


@@ -467,12 +412,12 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000128">
<rdfs:label
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete_identifier</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
- <IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">_identifier is a
container under information content entity for collecting types of terms to
indicate a specific instance or clas of what was used or participated in an
investigation. Identifiers are borne by a product or its packaging, and can
be encoded in a variety of other information objects, such as bar codes,
numerals, or patterns of dots.
+ <obo:IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">_identifier is a
container under information content entity for collecting types of terms to
indicate a specific instance or clas of what was used or participated in an
investigation. Identifiers are borne by a product or its packaging, and can
be encoded in a variety of other information objects, such as bar codes,
numerals, or patterns of dots.

-Note: everybody agreed that identifier is probably a too general term. We
however felt that it would be appropriate to group &quot;identifiying&quot;
terms under some kind of umbrella. We therefore propose to use _identifier
for that purpose. As per OBI conventions, the _ prefixing identifier
indicates that this is a helper class and shouldn&apos;t be considered as
final.</IAO_0000116>
+Note: everybody agreed that identifier is probably a too general term. We
however felt that it would be appropriate to group &quot;identifiying&quot;
terms under some kind of umbrella. We therefore propose to use _identifier
for that purpose. As per OBI conventions, the _ prefixing identifier
indicates that this is a helper class and shouldn&apos;t be considered as
final.</obo:IAO_0000116>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000121"/>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000226"/>
+ <obo:IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000121"/>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000226"/>
</owl:Class>


@@ -482,10 +427,10 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000141">
<rdfs:label
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete_digital
quality</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
- <IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Need to rework
digital entity. Digital quality was suggested by Barry.</IAO_0000116>
+ <obo:IAO_0000116
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Need to rework
digital entity. Digital quality was suggested by Barry.</obo:IAO_0000116>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000116>3/22/2009 Alan Ruttenberg, obsoleted per
http://groups.google.com/group/information-ontology/browse_thread/thread/789ad4b7708d5cf4</IAO_0000116>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000116>3/22/2009 Alan Ruttenberg, obsoleted per
http://groups.google.com/group/information-ontology/browse_thread/thread/789ad4b7708d5cf4</obo:IAO_0000116>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
</owl:Class>


@@ -496,14 +441,14 @@
<rdfs:label xml:lang="en">obsolete_survival curve</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000115 xml:lang="en">A survival curve is a report graph
which is a graphical representation of data where the percentage of
survival is plotted as a function of time.</IAO_0000115>
- <IAO_0000117 xml:lang="en">PERSON:Chris Stoeckert</IAO_0000117>
- <IAO_0000117 xml:lang="en">PERSON:James Malone</IAO_0000117>
- <IAO_0000117 xml:lang="en">PERSON:Melanie Courtot</IAO_0000117>
- <IAO_0000119 xml:lang="en">WEB:
http://www.graphpad.com/www/book/survive.htm</IAO_0000119>
- <IAO_0000111 xml:lang="en">obsolete_survival curve</IAO_0000111>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
- <IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
+ <obo:IAO_0000115 xml:lang="en">A survival curve is a report graph
which is a graphical representation of data where the percentage of
survival is plotted as a function of time.</obo:IAO_0000115>
+ <obo:IAO_0000117 xml:lang="en">PERSON:Chris
Stoeckert</obo:IAO_0000117>
+ <obo:IAO_0000117 xml:lang="en">PERSON:James
Malone</obo:IAO_0000117>
+ <obo:IAO_0000117 xml:lang="en">PERSON:Melanie
Courtot</obo:IAO_0000117>
+ <obo:IAO_0000119 xml:lang="en">WEB:
http://www.graphpad.com/www/book/survive.htm</obo:IAO_0000119>
+ <obo:IAO_0000111 xml:lang="en">obsolete_survival
curve</obo:IAO_0000111>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000114
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
</owl:Class>


@@ -513,10 +458,10 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000576">
<rdfs:label
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete_establishing
a CRID registry</rdfs:label>
<rdfs:subClassOf
rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
- <IAO_0000115
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">a planned process
with the objective to establish a system that allows to refer to specific
entities of a certain kind and store information about them, by
establishing a CRID registry and plan specifications for the process of 1)
assigning a CRID and 2) looking up a CRID.</IAO_0000115>
+ <obo:IAO_0000115
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">a planned process
with the objective to establish a system that allows to refer to specific
entities of a certain kind and store information about them, by
establishing a CRID registry and plan specifications for the process of 1)
assigning a CRID and 2) looking up a CRID.</obo:IAO_0000115>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000116>MC, 20101124: deprecated following discussion at IAO
call 20101124. Term was deemed not necessary - no use case for
now.</IAO_0000116>
- <IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
+ <obo:IAO_0000116>MC, 20101124: deprecated following discussion at
IAO call 20101124. Term was deemed not necessary - no use case for
now.</obo:IAO_0000116>
+ <obo:IAO_0000231
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000103"/>
</owl:Class>


@@ -556,8 +501,8 @@
<rdf:type
rdf:resource="http://purl.obolibrary.org/obo/IAO_0000225"/>
<rdfs:label xml:lang="en">other</rdfs:label>
<owl:deprecated
rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
- <IAO_0000116 xml:lang="en">This is to be used if none of the
existing instances cover the reason for obsolescence. An editor note should
indicate this new reason.</IAO_0000116>
- <IAO_0000116 xml:lang="en">We expect to be able to mine these new
reasons and add instances as required.</IAO_0000116>
+ <obo:IAO_0000116 xml:lang="en">This is to be used if none of the
existing instances cover the reason for obsolescence. An editor note should
indicate this new reason.</obo:IAO_0000116>
+ <obo:IAO_0000116 xml:lang="en">We expect to be able to mine these
new reasons and add instances as required.</obo:IAO_0000116>
</owl:NamedIndividual>
</rdf:RDF>

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