I don't recall learning about Johnson near misses before, so I did a
little reading. These two links from 2017 and 2019 are worth
checking out even if you know all about Johnson solids and near
misses already.
Evelyn Lamb brief intro article, 2017:
http://nautil.us/issue/49/the-absurd/the-impossible-mathematics-of-the-real-world
Blog post from Craig Kaplan of Waterloo, 2019, including discussion
of the real-world TRAP cage molecule:
https://isohedral.ca/a-molecular-near-miss/
As background, this all builds on something near and dear to the
hearts of 3D geometers and puzzle constructors, the 92 Johnson
solids, enumerated and named by Norman Johnson in 1966.
https://en.wikipedia.org/wiki/Johnson_solid
The notion of "imperfect" mathematical structures seems like a
really big deal to me: I imagine that the chemistry of the real
world will inevitably be a zoo of geometric near misses that allow
molecules to stay together.
I also liked the connection to music in Lamb's article: music seems
to thrive on near-misses, frequency wise, and in particular, 2 to
the power 7/12 is equal to 1.498, "close enough" to 3/2 for musical
fifths to sound harmonious, and 2 to the power 5/12 is equal to
1.335, "close enough" to 4/3. So, a major chord (tonic, third,
fifth, octave) is built on two such near-misses, and the variety of
tempered musical scales play around with what is "close enough" in
subtle ways that can alter the feel of the music.
Fun!
Marc