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It looks like I didn't include labeling the samples as an option since the tool was benchmarked on very large datasets (where labels would be inconvenient). I'll note it as something to add for a future release. The best (very sub-optimal) solution for now would be to include the sample labels as a metadata row.Thanks,Eric
On Tue, Aug 6, 2019 at 11:49 AM utritala <urm...@gmail.com> wrote:
Hello,--I am trying to use humann2_barplot but the sample labels are not displayed.My input file and the output image is attached with this email. Here is my command:humann2_barplot -i all_samples_pathabundances_humann2_relab_stratified_for_plotting.pcl -f 1CMET2-PWY --focal-metadatum Infant --output all_samples_pathabundances_humann2_relab_stratified_humann2_barplot2.pngAny help you could provide will be great.Many thanks.
You received this message because you are subscribed to the Google Groups "HUMAnN Users" group.
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It looks like I didn't include labeling the samples as an option since the tool was benchmarked on very large datasets (where labels would be inconvenient). I'll note it as something to add for a future release. The best (very sub-optimal) solution for now would be to include the sample labels as a metadata row.Thanks,Eric
On Tue, Aug 6, 2019 at 11:49 AM utritala <urm...@gmail.com> wrote:
Hello,--I am trying to use humann2_barplot but the sample labels are not displayed.My input file and the output image is attached with this email. Here is my command:humann2_barplot -i all_samples_pathabundances_humann2_relab_stratified_for_plotting.pcl -f 1CMET2-PWY --focal-metadatum Infant --output all_samples_pathabundances_humann2_relab_stratified_humann2_barplot2.pngAny help you could provide will be great.Many thanks.
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To view this discussion on the web visit https://groups.google.com/d/msgid/humann-users/da103efd-ec8a-474e-837f-38cf97668d21%40googlegroups.com.