After installing Docker Desktop I successfully ran HLAthena.
However, windows semantics were necessary in the -v and -w options provided in the instructions at
http://hlathena.tools/
After creating the directory
D:\HLAthena
Then opening a Windows command prompt window
To get the documentation:
D:\HLAthena>docker run -w
/pwd ssarkizova/hlathena-external predict --help
To run predictions:
D:\HLAthena>docker run -v D:\HLAthena\:/pwd -w /pwd
ssarkizova/hlathena-external predict --runID sample_input_peptides --rundir ./ --alleles A0101 --peptides
./sample_input_peptides.txt
--Karl