mergeSAM

[zhenzhen...@gmail.com]

Dear Nicolas,

There are no error reported during the process, but when i  check the mergeSAM.log,  there is something wrong and  i have no idea whether this will affect the other results.

Thanks so much for your kind reply.

[nservant]

Hi,

I do not see anything wrong here ?

If you are talking about the message on the index, this is just a warning ... nothing serious ;)

best

[zhenzhen...@gmail.com]

Hi  Nicolas,

Thanks so much for your kind reply.I am biological background and have little knowledge of the bioinformatics.  And I am wondering whether this bwt2pairs.bam file can be converted to bw file with bamCoverage?  When I try to do this, the following error occurs:

I have no idea about this. could you help me with this?

Thanks so much.

Best