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HEROHE Grand-Challenge
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Joerg Vandenhirtz
,
jordi...@gmail.com
2
4/30/20
Q&A
can I still join to download the dataset even though the submission deadline (Jan 28) is over?
I am also interested in having access to the data, but it seems no possible, right? El dijous, 13
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Q&A
can I still join to download the dataset even though the submission deadline (Jan 28) is over?
I am also interested in having access to the data, but it seems no possible, right? El dijous, 13
4/30/20
HEROHE Grand-Challenge
, …
Eduardo Conde-Sousa
5
1/22/20
Q&A
New: Google Drive Shared Folder
Hi Indeed it is late to upload the data to another server and allow users to still have time to work
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Q&A
New: Google Drive Shared Folder
Hi Indeed it is late to upload the data to another server and allow users to still have time to work
1/22/20
Md. Rezwanul Haque
, …
Vincenzo Della Mea
3
11/1/19
Q&A
Download dataset into google drive.
Since now it seems we reached the users limit on the server, something different needs to be provided
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Q&A
Download dataset into google drive.
Since now it seems we reached the users limit on the server, something different needs to be provided
11/1/19
Anthony Leo
, …
Andreas Turzynski
6
6/3/20
Q&A
Converted JPEG Image
Thanks Vincenzo. I was bit curious on the data format and want to start from the original source of
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Q&A
Converted JPEG Image
Thanks Vincenzo. I was bit curious on the data format and want to start from the original source of
6/3/20
har...@onwardhealth.co
, …
Vincenzo Della Mea
4
6/1/20
Q&A
Not able to open the images
You can convert them using 3DHistech software. Check other posts in this thread for further info. On
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Q&A
Not able to open the images
You can convert them using 3DHistech software. Check other posts in this thread for further info. On
6/1/20
Gil Shamai
,
Eduardo Conde-Sousa
2
4/14/20
Q&A
1. Does every slide belong to a different patient? 2. was the train-test partition done randomly?
Hi All slides were taken from different patients. There was no independence in the sense that they do
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Q&A
1. Does every slide belong to a different patient? 2. was the train-test partition done randomly?
Hi All slides were taken from different patients. There was no independence in the sense that they do
4/14/20
econdesousa
, …
Eduardo Conde-Sousa
7
2/3/20
Q&A
Temporary results
Hi Vincenzo I'm still validating the code. As you might expect, this is a difficult and time-
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Q&A
Temporary results
Hi Vincenzo I'm still validating the code. As you might expect, this is a difficult and time-
2/3/20
econdesousa
, …
Eduardo Conde-Sousa
3
1/28/20
Q&A
Submission Notes
Hi Vincenzo A little bit to late for my answer, sorry! Yes you can submit everything in the
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Q&A
Submission Notes
Hi Vincenzo A little bit to late for my answer, sorry! Yes you can submit everything in the
1/28/20
joangi...@gmail.com
, …
Eduardo Conde-Sousa
3
1/27/20
Q&A
Cannot upload model ".pth" file
HI I already have some submissions of ~1.3GB, so you should be able to submit mor than 500MB.
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Q&A
Cannot upload model ".pth" file
HI I already have some submissions of ~1.3GB, so you should be able to submit mor than 500MB.
1/27/20
a.n.d...@gmail.com
, …
Eduardo Conde-Sousa
5
1/24/20
Q&A
Input Format
Hi Andreas First of all. I'm not part of the manufactures company. The choice of this software
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Q&A
Input Format
Hi Andreas First of all. I'm not part of the manufactures company. The choice of this software
1/24/20
Andreas Turzynski
,
Eduardo Conde-Sousa
4
1/22/20
Q&A
Not able to submit the pipeline
Thank you for your quick response. I will try. Andreas Am Mittwoch, 22. Januar 2020 11:18:28 UTC+1
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Q&A
Not able to submit the pipeline
Thank you for your quick response. I will try. Andreas Am Mittwoch, 22. Januar 2020 11:18:28 UTC+1
1/22/20
R Quintino
,
Eduardo Conde-Sousa
2
1/13/20
Q&A
Grading, association to HER2 status stratification
Hi All grades are represented in the challenge. We do not garante that its balanced. best Eduardo ***
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Q&A
Grading, association to HER2 status stratification
Hi All grades are represented in the challenge. We do not garante that its balanced. best Eduardo ***
1/13/20
R Quintino
,
Eduardo Conde-Sousa
2
1/13/20
Q&A
Final usage of proposed challenge?
Hi Ultimatly, the "specific clinical/diagnosis scenario" would be exactly replacing IHC/ISH
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Q&A
Final usage of proposed challenge?
Hi Ultimatly, the "specific clinical/diagnosis scenario" would be exactly replacing IHC/ISH
1/13/20
hongyi...@gmail.com
,
Eduardo Conde-Sousa
3
1/10/20
Q&A
Results on test datasets
Sorry I hit enter inadvertently As I was saying, I have two submissions yesterday (user: Arontier_HYY
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Q&A
Results on test datasets
Sorry I hit enter inadvertently As I was saying, I have two submissions yesterday (user: Arontier_HYY
1/10/20
Vincenzo Della Mea
,
Eduardo Conde-Sousa
4
1/10/20
Q&A
Training image #15
Thanks, it was indeed an incomplete download. However, the slide converter never complained about
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Q&A
Training image #15
Thanks, it was indeed an incomplete download. However, the slide converter never complained about
1/10/20
R Quintino
,
Eduardo Conde-Sousa
4
1/7/20
Q&A
Pixel Resolution and magnification used?
Hi, yes, they do cheers Eduardo *********************************************************************
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Q&A
Pixel Resolution and magnification used?
Hi, yes, they do cheers Eduardo *********************************************************************
1/7/20
R Quintino
,
Eduardo Conde-Sousa
3
1/6/20
Q&A
Release of test set, role of expert annotations, test overfitting
Hi Eduardo, thanks for the reply & clarifications Think it's more clear for me way the
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Q&A
Release of test set, role of expert annotations, test overfitting
Hi Eduardo, thanks for the reply & clarifications Think it's more clear for me way the
1/6/20
hongyi...@gmail.com
,
Eduardo Conde-Sousa
2
1/6/20
Q&A
The image 325 that has no tumor, do you refer wsi in the train dataset or in the test dataset?
Hi Sorry for the ambiguity. On the challenge's site it is unambiguous, but in fact the email was
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Q&A
The image 325 that has no tumor, do you refer wsi in the train dataset or in the test dataset?
Hi Sorry for the ambiguity. On the challenge's site it is unambiguous, but in fact the email was
1/6/20
R Quintino
, …
econdesousa
3
1/6/20
Q&A
All cases are positive for BC right? any specific subtype?
HI Bellow it follows the pathologist's answer: "All cases are positive for BC. The majority
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Q&A
All cases are positive for BC right? any specific subtype?
HI Bellow it follows the pathologist's answer: "All cases are positive for BC. The majority
1/6/20
chenchc
, …
Eduardo Conde-Sousa
5
1/4/20
Q&A
Submitting code by Dockerfile or Docker image
Thanks Rui I'll take that in mind. Hope you can finish everything on time. All the best Eduardo A
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Q&A
Submitting code by Dockerfile or Docker image
Thanks Rui I'll take that in mind. Hope you can finish everything on time. All the best Eduardo A
1/4/20
HEROHE Grand-Challenge
, …
Eduardo Conde-Sousa
6
1/2/20
Q&A
Test dataset release
Hi Vincenzo I was away these last days. Sorry about the delayed answer. I tried zipping all but the
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Q&A
Test dataset release
Hi Vincenzo I was away these last days. Sorry about the delayed answer. I tried zipping all but the
1/2/20
nitin....@airamatrix.com
,
Eduardo Conde-Sousa
2
1/2/20
Q&A
Regarding Code submission
Hi Nitin As referred somewhere else at the forum, what I need you to submit is a code/compilation
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Q&A
Regarding Code submission
Hi Nitin As referred somewhere else at the forum, what I need you to submit is a code/compilation
1/2/20
moremo...@gmail.com
, …
Eduardo Conde-Sousa
6
12/19/19
Q&A
Submitting methodology
Hi please read bellow: Just to be sure, this code we should provide is just for scoring/inference
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Q&A
Submitting methodology
Hi please read bellow: Just to be sure, this code we should provide is just for scoring/inference
12/19/19
ed18...@smail.iitm.ac.in
,
piter....@gmail.com
2
12/18/19
Q&A
Problem in download
Hi, I'm having the same issue with missing .dat files when downloaded from GDrive. FTP server did
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Q&A
Problem in download
Hi, I'm having the same issue with missing .dat files when downloaded from GDrive. FTP server did
12/18/19
HEROHE Grand-Challenge
12/17/19
Q&A
HEROHE grand-challenge - RULES UPDATE
Dear HEROHE grand-challenge participant. Recent deadline changes at the 2020 European Congress in
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Q&A
HEROHE grand-challenge - RULES UPDATE
Dear HEROHE grand-challenge participant. Recent deadline changes at the 2020 European Congress in
12/17/19
dsk...@gmail.com
,
Anthony Richardson
2
12/12/19
Q&A
Bad image
I did not observe any issues with it - this is how it looks on my machine. On Thursday, December 12,
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Q&A
Bad image
I did not observe any issues with it - this is how it looks on my machine. On Thursday, December 12,
12/12/19
dsk...@gmail.com
,
Vincenzo Della Mea
3
12/11/19
Q&A
Image Resize
I didn't have any luck with SlideConverter (of CaseViewer). I was able to use Qupatha and export
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Q&A
Image Resize
I didn't have any luck with SlideConverter (of CaseViewer). I was able to use Qupatha and export
12/11/19
jaco...@mit.edu
, …
Eduardo Conde-Sousa
4
12/5/19
Q&A
Size of test set
Dear Vincenzo The idea is to validate all the methods. Of course depending on the number of submitted
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Q&A
Size of test set
Dear Vincenzo The idea is to validate all the methods. Of course depending on the number of submitted
12/5/19
swarna a
11/30/19
Q&A
Data
Hi, Im trying to download data from drive. I used command like wget, curl , google api with oauth etc
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Q&A
Data
Hi, Im trying to download data from drive. I used command like wget, curl , google api with oauth etc
11/30/19
陈皓
, …
Vincenzo Della Mea
4
11/29/19
Q&A
The annotation of the image
I am not among the organizers, however something "not yet technologically feasible" is
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Q&A
The annotation of the image
I am not among the organizers, however something "not yet technologically feasible" is
11/29/19
cwta...@gmail.com
11/28/19
Q&A
Getting dataset
I believe a better strategy should be provided for the interested parties to download the dataset as
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Q&A
Getting dataset
I believe a better strategy should be provided for the interested parties to download the dataset as
11/28/19
dsk...@gmail.com
, …
Eduardo Conde-Sousa
9
11/26/19
Q&A
.dat file
I defiantly owe you an apology for your time. I wasn't paying attention to details. Thank you for
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Q&A
.dat file
I defiantly owe you an apology for your time. I wasn't paying attention to details. Thank you for
11/26/19
the.marya...@gmail.com
,
Eduardo Conde-Sousa
2
11/26/19
Q&A
Data blur
Hi They aren't. How did you open the mrsx files? Did you use case viewer to open them and slide
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Q&A
Data blur
Hi They aren't. How did you open the mrsx files? Did you use case viewer to open them and slide
11/26/19