hapi-fhir-jpaserver-starter

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Glenn Murray

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Jan 4, 2019, 1:20:33 PM1/4/19

to HAPI FHIR

Hello,

I just cloned hapi-fhir-jpaserver-starter, with hapi-fhir 3.7.0-SNAPSHOT as parent ( Windows 10, Maven 3.6 )

I am getting same error with jetty:run and installing in Tomcat 9

( Stack Trace from jetty:run below. Tomcat error log shows essentially the same ).

Any ideas, someone?

Thanks,

Glenn

NOTE - I initially got a compilation error not finding package ca.uhn.fhir.jpa.subscription.resthook.

Thinking this was related to recent restructuring of main hapi-fhir project around subscriptions, I got around that by commenting out code referencing this, which seemed harmless on the surface since the subscriptions are disabled by default:

* If you want to support subscriptions, you will want to register interceptors for

* any type of subscriptions you want to support.

boolean subscriptionsEnabled = false;

if (subscriptionsEnabled) { // <-- DISABLED RIGHT NOW

// SubscriptionRestHookInterceptor restHookInterceptor = myAppCtx.getBean(SubscriptionRestHookInterceptor.class);

...

2019-01-04 09:49:00.828 [main] ERROR o.s.web.context.ContextLoader [ContextLoader.java:312] Context initialization failed

org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'matchResourceUrlService': Unsatisfied dependency expressed through field 'myMatchUrlService'; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'matchUrlService': Unsatisfied dependency expressed through field 'mySearchParamRegistry'; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'searchParamRegistry': Unsatisfied dependency expressed through field 'myModelConfig'; nested exception is org.springframework.beans.factory.NoSuchBeanDefinitionException: No qualifying bean of type 'ca.uhn.fhir.jpa.model.entity.ModelConfig' available: expected at least 1 bean which qualifies as autowire candidate. Dependency annotations: {@org.springframework.beans.factory.annotation.Autowired(required=true)}

at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredFieldElement.inject(AutowiredAnnotationBeanPostProcessor.java:596)

at org.springframework.beans.factory.annotation.InjectionMetadata.inject(InjectionMetadata.java:90)

at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor.postProcessProperties(AutowiredAnnotationBeanPostProcessor.java:374)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1378)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:575)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:498)

at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:320)

at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)

at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:318)

at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:199)

at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:846)

at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:863)

at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:546)

at org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:400)

at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:291)

at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:103)

at org.eclipse.jetty.server.handler.ContextHandler.callContextInitialized(ContextHandler.java:890)

at org.eclipse.jetty.servlet.ServletContextHandler.callContextInitialized(ServletContextHandler.java:532)

at org.eclipse.jetty.server.handler.ContextHandler.startContext(ContextHandler.java:853)

at org.eclipse.jetty.servlet.ServletContextHandler.startContext(ServletContextHandler.java:344)

at org.eclipse.jetty.webapp.WebAppContext.startWebapp(WebAppContext.java:1515)

at org.eclipse.jetty.maven.plugin.JettyWebAppContext.startWebapp(JettyWebAppContext.java:360)

at org.eclipse.jetty.webapp.WebAppContext.startContext(WebAppContext.java:1477)

at org.eclipse.jetty.server.handler.ContextHandler.doStart(ContextHandler.java:785)

at org.eclipse.jetty.servlet.ServletContextHandler.doStart(ServletContextHandler.java:261)

at org.eclipse.jetty.webapp.WebAppContext.doStart(WebAppContext.java:545)

at org.eclipse.jetty.maven.plugin.JettyWebAppContext.doStart(JettyWebAppContext.java:428)

at org.eclipse.jetty.util.component.AbstractLifeCycle.start(AbstractLifeCycle.java:68)

at org.eclipse.jetty.util.component.ContainerLifeCycle.start(ContainerLifeCycle.java:133)

at org.eclipse.jetty.util.component.ContainerLifeCycle.doStart(ContainerLifeCycle.java:115)

at org.eclipse.jetty.server.handler.AbstractHandler.doStart(AbstractHandler.java:113)

at org.eclipse.jetty.server.handler.ContextHandlerCollection.doStart(ContextHandlerCollection.java:167)

at org.eclipse.jetty.util.component.AbstractLifeCycle.start(AbstractLifeCycle.java:68)

at org.eclipse.jetty.util.component.ContainerLifeCycle.start(ContainerLifeCycle.java:133)

at org.eclipse.jetty.util.component.ContainerLifeCycle.doStart(ContainerLifeCycle.java:115)

at org.eclipse.jetty.server.handler.AbstractHandler.doStart(AbstractHandler.java:113)

at org.eclipse.jetty.util.component.AbstractLifeCycle.start(AbstractLifeCycle.java:68)

at org.eclipse.jetty.util.component.ContainerLifeCycle.start(ContainerLifeCycle.java:133)

at org.eclipse.jetty.server.Server.start(Server.java:418)

at org.eclipse.jetty.util.component.ContainerLifeCycle.doStart(ContainerLifeCycle.java:107)

at org.eclipse.jetty.server.handler.AbstractHandler.doStart(AbstractHandler.java:113)

at org.eclipse.jetty.server.Server.doStart(Server.java:385)

at org.eclipse.jetty.util.component.AbstractLifeCycle.start(AbstractLifeCycle.java:68)

at org.eclipse.jetty.maven.plugin.AbstractJettyMojo.startJetty(AbstractJettyMojo.java:461)

at org.eclipse.jetty.maven.plugin.AbstractJettyMojo.execute(AbstractJettyMojo.java:327)

at org.eclipse.jetty.maven.plugin.JettyRunMojo.execute(JettyRunMojo.java:183)

at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:137)

at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:210)

at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:156)

at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:148)

at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:117)

at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:81)

at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:56)

at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)

at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:305)

at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:192)

at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:105)

at org.apache.maven.cli.MavenCli.execute(MavenCli.java:956)

at org.apache.maven.cli.MavenCli.doMain(MavenCli.java:288)

at org.apache.maven.cli.MavenCli.main(MavenCli.java:192)

at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)

at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)

at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)

at java.base/java.lang.reflect.Method.invoke(Method.java:566)

at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)

at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)

at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode(Launcher.java:415)

at org.codehaus.plexus.classworlds.launcher.Launcher.main(Launcher.java:356)

at org.codehaus.classworlds.Launcher.main(Launcher.java:47)

Caused by: org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'matchUrlService': Unsatisfied dependency expressed through field 'mySearchParamRegistry'; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'searchParamRegistry': Unsatisfied dependency expressed through field 'myModelConfig'; nested exception is org.springframework.beans.factory.NoSuchBeanDefinitionException: No qualifying bean of type 'ca.uhn.fhir.jpa.model.entity.ModelConfig' available: expected at least 1 bean which qualifies as autowire candidate. Dependency annotations: {@org.springframework.beans.factory.annotation.Autowired(required=true)}