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to hahnlab-cafe
I have a data set that runs in CAFE 2 but when I run the exact same data set and cafe script, I get an error, "Failed to identify species for gene families" I'm using the latest version from github which I compiled and run on mac os. I ran the example data set and it runs fine. I compared my script/data to the examples and I don't see any differences that would account for the error. I've attached my data files in case anyone could have a look and see whats wrong.