How can I know the family ID of the expansion and contraction familys in each species after runing CAFE5

[xingbang lu]

Dear developer 

         Hi!

 currently, it seems that the software of gene family analysis is the version before Cafe V5.0 (although user need to edit the script file of cafe, there is a set of mature analysis process for the downstream analysis, including extracting the contraction and expansion gene families and ploting). However, in cafe V5.0, the results do not seem to be the same as in the previous version to summary with cafetutorial_report_analysis.py. Just calculate the number of gene families that expand and contract in each species form Base_clade_results.txt, and it is not known which gene families have changed (like the summary_ run1_ fams.txt in the previous version)，And it can't be visualized, I'm wonder if there is a corresponding script to complete these functions?

Thanks！

[Érica Souza]

Hi folks

Somebody know the answer for this topic?