GRIT for Single End Reads RNA-seq

[Husna Nugrahapraja]

Hi Nathan,

I would like to know what will happen when I run GRIT for Single End (SE) RNA-seq

Well, I have read the instruction and its already said that "GRIT only works with stranded and paired RNA-seq data".

Thank you very much.

Regards,

Husna

[Nathan Boley]

Dear Husna,

It currently only works for paired end reads. Adding single end support is pretty high on my TODO list, but I just started a new postdoc and so unfortunately I haven't had much time to spend on GRIT. I've also promised to add unstranded support, but have yet to deliver. 

What aspect of GRIT are you most interested in (element discovery or quantification)?

Best, Nathan

[Husna Nugrahapraja]

Dear Nathan,

Thanks for your response! I really appreciate it.

I pretty much interested with element discovery Nathan

Hopefully, you can make it available soon.

Thank you

Regards,

Husna