Thank you for your response, I tried to figure out changes but as part of this migration apart from version upgrades I have added/edited below properties in app.gwt.xml.
<set-property name="user.agent" value="ie8,gecko1_8,safari"/>
<set-configuration-property name ='xsiframe.failIfScriptTag' value='FALSE'>
other properties are present like
<inherits name ="com.google.gwt.logging.Logging"/>
<set-property name="gwt.logging.loglevel" value="FINE" />
<set-property name="gwt.logging.systemHandler" value="ENABLED" />
<set-property name="gwt.logging.consoleHandler" value="ENABLED" />
<set-property name="gwt.logging.developmentModeHandler" value="ENABLED" />
<set-property name="gwt.logging.simpleRemoteHandler" value="DISABLED" />
apart from these changes, I haven't changed any code also I could see entries for Ext.BLANK_IMAGE_URL= '../ext/resources//somepath/s.gif' in js files present in /war/project/js folder.
Can you please let me know, what I might be missing?