GBrowse : subtrack select.

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maxime....@gmail.com

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Oct 17, 2013, 10:30:46 AM10/17/13
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Hello

On GBrowse,
Can I use subtrack select on score field in GFF3 to classify annotations regarding a threshold

exemple data
...
chrom1 test gene 695 715 50 + . ID=g1;Name=G1
chrom1 test gene 700 750 34 + . ID=g2;Name=G2
chrom1 test gene 400 475 120 + . ID=g3;Name=G3
chrom1 test gene 630 780 190 + . ID=g4;Name=G4
...

All in one track
first subtrack with G1 and G2
second subtrack with G3 and G4

something like:
subtrack select = Score ???
subtrack label = score<100; score>100;

Regards.
Maxime HEBRARD

Scott Cain

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Oct 17, 2013, 10:50:16 AM10/17/13
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Hi Maxime,

I'm forwarding this to the GBrowse mailing list.

Scott




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buko...@goodnet.sk

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Mar 21, 2014, 8:50:27 PM3/21/14
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Dňa štvrtok, 17. októbra 2013 16:30:46 UTC+2 maxime....@gmail.com napísal(-a):

buko...@goodnet.sk

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Mar 21, 2014, 8:50:53 PM3/21/14
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Dňa štvrtok, 17. októbra 2013 16:30:46 UTC+2 maxime....@gmail.com napísal(-a):

Amelia Ireland

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Mar 21, 2014, 8:55:41 PM3/21/14
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I've forwarded your email to the GBrowse mailing list, where you should receive a response soon.


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