Yes, I believe you can probably do this if you use IMAP, if you have an
easier way to eliminate the duplicates on your PC. When you login and sync
up again, it should delete the ones on the server to match. Just because
you're using IMAP doesn't mean you won't be keeping all your messages "in
the webmail" (on their servers) too.
Andy
But that's why I suggested IMAP.
If you delete them on your computer, and sync up with IMAP, it's my
understanding that the copies on Google's servers will also delete. That's
the nice thing about using IMAP.
But I'm not speaking from personal experience on this.
Andy