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GlycReSoft

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A mailing list of announcements, discussion, and support for GlycReSoft, software for analyzing glycan and glycopeptide liquid chromatography mass spectrometry (LC-MS) data.

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Chia-wei Lin, Joshua Klein2

Jan 19

Thank you for your interest in my work. I suspect the problem is that when I developed the procedure

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Thank you for your interest in my work. I suspect the problem is that when I developed the procedure

Jan 19

Sahar Sabry, Joshua Klein5

10/8/25

Glycans results

Thank you Sahar Sent from Yahoo Mail for iPhone On Wednesday, October 8, 2025, 14:40, Joshua Klein

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Glycans results

Thank you Sahar Sent from Yahoo Mail for iPhone On Wednesday, October 8, 2025, 14:40, Joshua Klein

10/8/25

Tung Nguyen, Joshua Klein2

4/9/25

Help me evaluate results from glycresoft

The description of the scores in mathematical detail are given in the supplementary materials from

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Help me evaluate results from glycresoft

The description of the scores in mathematical detail are given in the supplementary materials from

4/9/25

Claire Moore, Joshua Klein4

12/17/24

Custom derivatization

Actually, it turns out reducing end modifications can legally be a chemical formula under the current

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Custom derivatization

Actually, it turns out reducing end modifications can legally be a chemical formula under the current

12/17/24

沙, Joshua Klein6

11/26/24

how can I use the output data from Decontools

Thank you for sharing your files. It seems there are both mass spectra and electromagnetic radiation

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how can I use the output data from Decontools

Thank you for sharing your files. It seems there are both mass spectra and electromagnetic radiation

11/26/24

Nguyen quang Tung, Joshua Klein2

11/11/24

help me about build hypothesis

GlycReSoft supports those monosaccharides, but you need to write them in compact three-letter code.

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help me about build hypothesis

GlycReSoft supports those monosaccharides, but you need to write them in compact three-letter code.

11/11/24

Soleimani Mashhadi, Ilnaz

11/29/23

glycan structure visualization

Hello, Is it possible to visualize data acquired from Glycresoft (as glycan structures)? And how can

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glycan structure visualization

Hello, Is it possible to visualize data acquired from Glycresoft (as glycan structures)? And how can

11/29/23

Soleimani Mashhadi, Ilnaz, Joshua Klein3

11/20/23

problem in glycresoft

Could you please share a screenshot of the main screen of the application? I can use that to diagnose

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problem in glycresoft

Could you please share a screenshot of the main screen of the application? I can use that to diagnose

11/20/23

8/29/23

Inquiry about Glycresoft

Hi, I'm a student at the University of Wisconsin. I'm doing selective modifications on the

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Inquiry about Glycresoft

Hi, I'm a student at the University of Wisconsin. I'm doing selective modifications on the

8/29/23

11/15/22

Dear Sir /Madam; We would like to use the latest version of Glycersoft to determine saccaride

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Dear Sir /Madam; We would like to use the latest version of Glycersoft to determine saccaride

11/15/22

Wojtkiewicz, Melinda, Joshua Klein9

10/11/22

error in preprocessing

I've released version 0.4.14 https://github.com/BostonUniversityCBMS/glycresoft_desktop/releases/

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error in preprocessing

I've released version 0.4.14 https://github.com/BostonUniversityCBMS/glycresoft_desktop/releases/

10/11/22

6/29/22

UniProt API Change

As of earlier today, UniProt changed their REST APIs, breaking GlycReSoft's integration with

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UniProt API Change

As of earlier today, UniProt changed their REST APIs, breaking GlycReSoft's integration with

6/29/22

Clendinen, Chaevien S, Joshua Klein4

5/29/22

Query: RES for sulfate ions and DBA

I'm not familiar with dibutylamine and how it'd behave in this circumstance. Is it a reducing

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Query: RES for sulfate ions and DBA

I'm not familiar with dibutylamine and how it'd behave in this circumstance. Is it a reducing

5/29/22

1/16/22

Announcement: Release v0.4.5

Windows Installer: https://github.com/BostonUniversityCBMS/glycresoft_desktop/releases/download/v0.

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Announcement: Release v0.4.5

Windows Installer: https://github.com/BostonUniversityCBMS/glycresoft_desktop/releases/download/v0.

1/16/22

Shuang (Jake) Yang, Joshua Klein3

4/14/21

Glycan Database for GlycReSoft

Thank you very much. It is very informatic. Best, Jake ----------------------------------------------

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Glycan Database for GlycReSoft

Thank you very much. It is very informatic. Best, Jake ----------------------------------------------

4/14/21

12/3/20

This release adds support for reading MGF files and MS2-only mzML and mzXML files to the spectrum

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This release adds support for reading MGF files and MS2-only mzML and mzXML files to the spectrum

12/3/20

9/27/20

Announcement: v0.4.2 Released

This release adds the following bug fixes: 1. Fixes a recent issue with corrected precursor

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Announcement: v0.4.2 Released

This release adds the following bug fixes: 1. Fixes a recent issue with corrected precursor

9/27/20

8/9/20

Announcement: v0.4.1 Released

This release adds bug fixes and performance optimizations, as well as the following new features: 1.

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Announcement: v0.4.1 Released

This release adds bug fixes and performance optimizations, as well as the following new features: 1.

8/9/20

Kumar, Chandni, … Joshua Klein6

8/8/20

Problems in analyzing my data, Chandni Kumar (Genecenter Munich)

Viral glycans really depend upon the host expression system. I've done work with chicken egg

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Problems in analyzing my data, Chandni Kumar (Genecenter Munich)

Viral glycans really depend upon the host expression system. I've done work with chicken egg

8/8/20

4/19/20

v0.4.0 Released

Version 0.4.0 has been released. This minor release fixes an error in the multipart score search

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v0.4.0 Released

Version 0.4.0 has been released. This minor release fixes an error in the multipart score search

4/19/20

3/28/20

GlycReSoft Release v0.3.14

This release includes the relative retention time prediction technique to be described in a

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GlycReSoft Release v0.3.14

This release includes the relative retention time prediction technique to be described in a

3/28/20

tlun...@nd.edu, mobiu...@gmail.com2

11/10/19

Failed to load target/decoys & other troubleshooting

This was addressed via email, because I didn't notice that the email came via the group and I did

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Failed to load target/decoys & other troubleshooting

This was addressed via email, because I didn't notice that the email came via the group and I did

11/10/19

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