modifying bpm files?

[jvanhan]

Hello,

I am looking for a solution to edit a bpm file. E.g. split the file
containing beads from multiple species into separate bpm files.

from previous posts in this group I learn that glu is capable of
reading bpm files. Can it also edit them and store the results as new
bpm?

thanks for your help.

Jack

[Kevin Jacobs <jacobs@bioinformed.com>]

Hi Jack,

GLU doesn't have a BPM writer, though it wouldn't be terribly difficult to build one.  However, I'm not sure why you'd need to split a BPM, since it is fairly easy to exclude loci in GenomeStudio (or whatever primary analysis tool) to achieve a similar effect.  Are you worried about artifacts within normalization groups perhaps?

-Kevin

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